myRT

myRT report for GCA_900100595.1_IMG-taxon_2593339217_annotated_assembly

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Seq: FMUA01000036.1 (14155 bp)
Overview 1 RT 1: 6014-13207 bp Neighborhood of RT #1 [6014, 13458] SEC-C RVT-UG3 RVT-UG8 Phage_int_SAM_3 INT_ICEBs1_C_like NikR Feature: gene Location: 6014-7084 bp Feature: domain Description: SEC-C Location: 6029-6080 bp Feature: domain Description: SEC-C Location: 6029-6080 bp Feature: gene Location: 7222-7947 bp Feature: gene Location: 8005-9369 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8320-8818 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8320-881 8 bp Feature: gene Location: 9553-11541 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10081-10525 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 0081 -1 0525 bp Feature: gene Location: 11770-12987 bp Feature: domain Description: Phage_int_SAM_3 Location: 11980-12154 bp Feature: domain Description: Phage_int_SAM_3 Location: 1 1 980-1 21 54 bp Feature: domain Description: INT_ICEBs1_C_like Location: 12352-12937 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 2352-1 2937 bp Feature: gene Location: 13048-13458 bp Feature: domain Description: NikR Location: 13060-13207 bp Feature: domain Description: NikR Location: 1 3060-1 3207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SEC-C (pfam02810), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), NikR (COG0864)

Seq: FMUA01000006.1 (159784 bp)
Overview 1 RT 1: 29222-35419 bp 2 RT 2: 41728-48073 bp Neighborhood of RT #1 [29222, 35419] Cas2_I_II_III RVT-UNC cas1_HMARI TIGR03986 TIGR03986 Neighborhood of RT #2 [41728, 48073] SIR2_2 Cas2_I_II_III RVT-UNC cas1_HMARI Feature: gene Location: 29222-29356 bp Feature: gene Location: 29962-30225 bp Feature: domain Description: Cas2_I_II_III Location: 29971-30187 bp Feature: domain Description: Cas2 _I_II_III Location: 2 9971-30187 bp Feature: gene Location: 30225-32144 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 30444-31014 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 30444-31014 bp Feature: domain Description: cas1_HMARI Location: 31161-32133 bp Feature: domain Description: cas1_HMARI Location: 31161-32 133 bp Feature: gene Location: 33000-34973 bp Feature: domain Description: TIGR03986 Location: 33054-33543 bp Feature: domain Description: TIGR03986 Location: 33054-33543 bp Feature: domain Description: TIGR03986 Location: 33591-34446 bp Feature: domain Description: TIGR03986 Location: 33591-34446 bp Feature: gene Location: 34973-35419 bp Feature: gene Location: 41728-42744 bp Feature: domain Description: SIR2_2 Location: 42103-42529 bp Feature: domain Description: SIR2 _2 Location: 42 103-42 52 9 bp Feature: gene Location: 43500-43763 bp Feature: domain Description: Cas2_I_II_III Location: 43509-43722 bp Feature: domain Description: Cas2 _I_II_III Location: 43509-4372 2 bp Feature: gene Location: 43763-45676 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 43973-44546 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 43973-44546 bp Feature: domain Description: cas1_HMARI Location: 44693-45665 bp Feature: domain Description: cas1_HMARI Location: 44693-45665 bp Feature: gene Location: 46447-47631 bp Feature: gene Location: 47747-48073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), cas1_HMARI (TIGR03641), TIGR03986 (CRISPR-associated protein), SIR2_2 (pfam13289)

Seq: FMUA01000060.1 (7048 bp)
Overview 1 RT 1: 4437-7046 bp Neighborhood of RT #1 [4437, 7045] COG3547 RVT-GII DDE_Tnp_1_4 Feature: gene Location: 4437-4577 bp Feature: gene Location: 4787-5944 bp Feature: domain Description: COG3547 Location: 4805-5816 bp Feature: domain Description: COG3 547 Location: 4805-5816 bp Feature: gene Location: 6017-6748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6317-6698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 17-6698 bp Feature: gene Location: 6866-7045 bp Feature: domain Description: DDE_Tnp_1_4 Location: 6965-7046 bp Feature: domain Description: DDE_Tnp_1_4 Location: 6965-7046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_1_4 (pfam13701)

Seq: FMUA01000019.1 (52986 bp)
Overview 1 RT 1: 49793-52539 bp Neighborhood of RT #1 [49793, 52892] nitrilase Acetyltransf_1 RVT-GII Feature: gene Location: 49793-50626 bp Feature: domain Description: nitrilase Location: 49808-50549 bp Feature: domain Description: nitrilase Location: 4 9808-5054 9 bp Feature: gene Location: 50636-51094 bp Feature: domain Description: Acetyltransf_1 Location: 50765-51041 bp Feature: domain Description: Acetyltransf_1 Location: 50765-5104 1 bp Feature: gene Location: 51591-52892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51846-52539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5184 6-52539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase (cl11424), Acetyltransf_1 (pfam00583)