myRT

myRT report for GCA_900100735.1_IMG-taxon_2651870170_annotated_assembly

Download annotations/find similar RTs

Seq: FNCJ01000005.1 (463427 bp)
Overview 1 RT 1: 23554-33934 bp Neighborhood of RT #1 [23554, 33934] pfam13191 RVT-UG1 Feature: gene Location: 23554-23946 bp Feature: gene Location: 24347-29302 bp Feature: domain Description: pfam13191 Location: 25160-25334 bp Feature: domain Description: pfam1 31 91 Location: 251 60-25334 bp Feature: gene Location: 29410-33237 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 30034-30559 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 30034-30559 bp Feature: gene Location: 33422-33934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam13191 (AAA_16;AAA ATPase domain), RVT-UG1

Seq: FNCJ01000009.1 (315398 bp)
Overview 1 RT 1: 27137-32657 bp Neighborhood of RT #1 [27137, 33655] HTH_3 RVT-GII GIIM Tra8 Tra8 Tra8 TniQ Feature: gene Location: 27137-27568 bp Feature: gene Location: 27794-28042 bp Feature: domain Description: HTH_3 Location: 27815-27923 bp Feature: domain Description: HTH_3 Location: 2 7815-2 792 3 bp Feature: gene Location: 29007-30539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29280-30018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 80-30018 bp Feature: domain Description: GIIM Note: maturase Location: 30114-30291 bp Feature: domain Description: GIIM Note: maturase Location: 30114-302 91 bp Feature: gene Location: 30849-32042 bp Feature: domain Description: Tra8 Location: 30903-31170 bp Feature: domain Description: Tra8 Location: 30903-31170 bp Feature: domain Description: Tra8 Location: 31266-31635 bp Feature: domain Description: Tra8 Location: 312 66-31635 bp Feature: domain Description: Tra8 Location: 31695-32028 bp Feature: domain Description: Tra8 Location: 31695-32 02 8 bp Feature: gene Location: 32285-33655 bp Feature: domain Description: TniQ Location: 32312-32657 bp Feature: domain Description: TniQ Location: 32 312 -32 657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT-GII, GIIM (pfam08388), Tra8 (COG2826), TniQ (pfam06527)

Seq: FNCJ01000001.1 (868734 bp)
Overview 1 RT 1: 368686-374472 bp Neighborhood of RT #1 [368686, 374546] GlxA GyrI-like RVT-Retrons DUF3375 DUF4194 Feature: gene Location: 368686-369540 bp Feature: domain Description: GlxA Location: 368716-369031 bp Feature: domain Description: GlxA Location: 3 68716-3 6903 1 bp Feature: domain Description: GyrI-like Location: 369085-369535 bp Feature: domain Description: GyrI-like Location: 3 69085-3 6953 5 bp Feature: gene Location: 369894-370472 bp Feature: gene Location: 370798-372249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 371344-371983 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 713 44-3 71983 bp Feature: gene Location: 372361-373896 bp Feature: domain Description: DUF3375 Location: 372475-373888 bp Feature: domain Description: DUF3 3 75 Location: 3 72475-3 73 888 bp Feature: gene Location: 373899-374546 bp Feature: domain Description: DUF4194 Location: 373962-374472 bp Feature: domain Description: DUF4194 Location: 3 73 962-3 74472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlxA (COG4977), GyrI-like (pfam06445), RVT-Retrons, DUF3375 (pfam11855), DUF4194 (pfam13835)

Seq: FNCJ01000045.1 (9866 bp)
Overview 1 RT 1: 1519-5597 bp Neighborhood of RT #1 [1519, 5597] YbjD YbjD RVT-Retrons HipB Feature: gene Location: 1519-1665 bp Feature: gene Location: 2095-3945 bp Feature: domain Description: YbjD Location: 2116-2260 bp Feature: domain Description: YbjD Location: 2116-2260 bp Feature: domain Description: YbjD Location: 3061-3271 bp Feature: domain Description: YbjD Location: 3061-3271 bp Feature: gene Location: 4061-4981 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4154-4733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 154 -4 733 bp Feature: gene Location: 5001-5306 bp Feature: domain Description: HipB Location: 5010-5268 bp Feature: domain Description: HipB Location: 5010-5268 bp Feature: gene Location: 5340-5597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), RVT-Retrons, HipB (COG1396)