myRT

myRT report for GCA_900100785.1_IMG-taxon_2675903225_annotated_assembly

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Seq: FNCP01000044.1 (22829 bp)
Overview 1 RT 1: 11109-15669 bp Neighborhood of RT #1 [11109, 15719] RarD RVT-UG2 COG1787 Feature: gene Location: 11109-11261 bp Feature: gene Location: 11385-12320 bp Feature: domain Description: RarD Location: 11421-12264 bp Feature: domain Description: RarD Location: 1 1 421 -1 2264 bp Feature: gene Location: 12936-14252 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13128-13962 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 31 28-1 3962 bp Feature: gene Location: 14309-14629 bp Feature: gene Location: 15108-15719 bp Feature: domain Description: COG1787 Location: 15213-15669 bp Feature: domain Description: COG1 787 Location: 1 521 3-1 5669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RarD (COG2962), RVT-UG2, COG1787 (Endonuclease, HJR/Mrr/RecB family )

Seq: FNCP01000005.1 (194987 bp)
Overview 1 RT 1: 75026-82211 bp Neighborhood of RT #1 [75026, 82261] MtbC1 BaeS RVT-GII HNHc RVT-GII GIIM RVT-GII PRK09776 PRK11107 5TM-5TMR_LYT Feature: gene Location: 75026-75661 bp Feature: domain Description: MtbC1 Location: 75038-75482 bp Feature: domain Description: MtbC1 Location: 75038-75482 bp Feature: gene Location: 75701-76063 bp Feature: domain Description: BaeS Location: 75821-76046 bp Feature: domain Description: BaeS Location: 7582 1-76046 bp Feature: gene Location: 76079-76993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76088-76193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76088-76193 bp Feature: domain Description: HNHc Note: nucleases Location: 76727-76883 bp Feature: domain Description: HNHc Note: nucleases Location: 7672 7-76883 bp Feature: gene Location: 77109-78356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77313-77970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77313-77970 bp Feature: domain Description: GIIM Note: maturase Location: 78051-78267 bp Feature: domain Description: GIIM Note: maturase Location: 78051-782 67 bp Feature: gene Location: 78860-79762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79169-79721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79169-7972 1 bp Feature: gene Location: 80427-81470 bp Feature: domain Description: PRK09776 Location: 80562-80961 bp Feature: domain Description: PRK09776 Location: 80562 -80961 bp Feature: domain Description: PRK11107 Location: 80982-81456 bp Feature: domain Description: PRK11107 Location: 80982 -81456 bp Feature: gene Location: 81686-82261 bp Feature: domain Description: 5TM-5TMR_LYT Location: 81749-82211 bp Feature: domain Description: 5TM-5TMR_LYT Location: 81749-82 2 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MtbC1 (COG5012), BaeS (COG0642), RVT-GII, HNHc (smart00507), GIIM (pfam08388), PRK09776 (putative diguanylate cyclase; Provisional), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), 5TM-5TMR_LYT (pfam07694)