myRT

myRT report for GCA_900101015.1_IMG-taxon_2608642105_annotated_assembly

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Seq: FNFZ01000063.1 (3707 bp)
Overview 1 RT 1: 2-2105 bp Neighborhood of RT #1 [2, 2170] RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 2-139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-86 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-86 bp Feature: gene Location: 196-1209 bp Feature: domain Description: Phage_int_SAM_1 Location: 250-487 bp Feature: domain Description: Phage_int_SAM_1 Location: 250-487 bp Feature: domain Description: INT_RitC_C_like Location: 577-1123 bp Feature: domain Description: INT_RitC_C_like Location: 577-1 1 23 bp Feature: gene Location: 1190-2170 bp Feature: domain Description: INT_RitB_C_like Location: 1523-2105 bp Feature: domain Description: INT_RitB_C_like Location: 1 523-21 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)

Seq: FNFZ01000067.1 (1705 bp)
Overview 1 RT 1: 285-1698 bp Neighborhood of RT #1 [285, 1703] RVT-GII HTH_28 Feature: gene Location: 285-497 bp Feature: gene Location: 701-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956-1340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956-1340 bp Feature: gene Location: 1452-1703 bp Feature: domain Description: HTH_28 Location: 1545-1698 bp Feature: domain Description: HTH_2 8 Location: 1545-1698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518)

Seq: FNFZ01000002.1 (220437 bp)
Overview 1 RT 1: 2-1663 bp Neighborhood of RT #1 [2, 1663] RVT-GII GIIM Feature: gene Location: 2-271 bp Feature: gene Location: 445-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-724 bp Feature: domain Description: GIIM Note: maturase Location: 784-1009 bp Feature: domain Description: GIIM Note: maturase Location: 784-1009 bp Feature: gene Location: 1081-1365 bp Feature: gene Location: 1496-1663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FNFZ01000059.1 (5610 bp)
Overview 1 RT 1: 3051-5535 bp Neighborhood of RT #1 [3051, 5609] SIR2_2 RVT-GII GIIM Feature: gene Location: 3051-4265 bp Feature: domain Description: SIR2_2 Location: 3618-4083 bp Feature: domain Description: SIR2_2 Location: 3618-4 083 bp Feature: gene Location: 4445-4951 bp Feature: gene Location: 5094-5609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5100-5250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5100-5250 bp Feature: domain Description: GIIM Note: maturase Location: 5310-5535 bp Feature: domain Description: GIIM Note: maturase Location: 5310-5535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-GII, GIIM (pfam08388)

Seq: FNFZ01000039.1 (23055 bp)
Overview 1 RT 1: 20325-22700 bp Neighborhood of RT #1 [20325, 22756] SGNH_arylesterase_like CsoR-like_DUF156_1 RVT-GII Feature: gene Location: 20325-21053 bp Feature: domain Description: SGNH_arylesterase_like Location: 20358-21006 bp Feature: domain Description: SGNH_arylesterase_like Location: 2035 8-21006 bp Feature: gene Location: 21124-21543 bp Feature: domain Description: CsoR-like_DUF156_1 Location: 21301-21538 bp Feature: domain Description: CsoR-like_DUF15 6_1 Location: 21301-215 38 bp Feature: gene Location: 22112-22756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22322-22700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22322-22700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SGNH_arylesterase_like (cd01839), CsoR-like_DUF156_1 (cd10158), RVT-GII

Seq: FNFZ01000035.1 (28224 bp)
Overview 1 RT 1: 1-3444 bp Neighborhood of RT #1 [1, 3701] RVT-GII COG5421 HAD HAD Feature: gene Location: 1-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-346 bp Feature: gene Location: 509-2221 bp Feature: domain Description: COG5421 Location: 1088-2006 bp Feature: domain Description: COG5421 Location: 1088-2006 bp Feature: gene Location: 2751-3701 bp Feature: domain Description: HAD Location: 2775-2895 bp Feature: domain Description: HAD Location: 2775-2895 bp Feature: domain Description: HAD Location: 3318-3444 bp Feature: domain Description: HAD Location: 3318-3444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG5421 (Transposase ), HAD (pfam12710)

Seq: FNFZ01000003.1 (211140 bp)
Overview 1 RT 1: 209039-211001 bp Neighborhood of RT #1 [209039, 211001] UbiE RVT-GII GIIM Feature: gene Location: 209039-209218 bp Feature: gene Location: 209223-209996 bp Feature: domain Description: UbiE Location: 209283-209694 bp Feature: domain Description: UbiE Location: 209283-209694 bp Feature: gene Location: 210111-210779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210114-210321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210114-210321 bp Feature: domain Description: GIIM Note: maturase Location: 210381-210594 bp Feature: domain Description: GIIM Note: maturase Location: 210381-210594 bp Feature: gene Location: 210843-211001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiE (COG2226), RVT-GII, GIIM (pfam08388)

Seq: FNFZ01000001.1 (295334 bp)
Overview 1 RT 1: 3-1073 bp Neighborhood of RT #1 [3, 1073] RVT-GII Feature: gene Location: 3-395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-309 bp Feature: gene Location: 535-816 bp Feature: gene Location: 945-1073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII