myRT

myRT report for GCA_900101185.1_IMG-taxon_2636416191_annotated_assembly

Download annotations/find similar RTs

Seq: FNKR01000002.1 (16162 bp)
Overview 1 RT 1: 3215-6825 bp Neighborhood of RT #1 [3215, 6872] PRK11670 RVT-GII GIIM PRK10922 PRK10922 Feature: gene Location: 3215-3571 bp Feature: domain Description: PRK11670 Location: 3218-3527 bp Feature: domain Description: PRK1 1 670 Location: 321 8-3527 bp Feature: gene Location: 3727-3897 bp Feature: gene Location: 4047-5381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4404-5019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4404-501 9 bp Feature: domain Description: GIIM Note: maturase Location: 5076-5289 bp Feature: domain Description: GIIM Note: maturase Location: 5076-5289 bp Feature: gene Location: 5644-6642 bp Feature: domain Description: PRK10922 Location: 5647-6541 bp Feature: domain Description: PRK1 0922 Location: 5647-6541 bp Feature: gene Location: 6633-6872 bp Feature: domain Description: PRK10922 Location: 6636-6825 bp Feature: domain Description: PRK1 0922 Location: 6636-6825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNKR01000003.1 (6504198 bp)
Overview 1 RT 1: 29493-34213 bp 2 RT 2: 330051-334988 bp 3 RT 3: 1601088-1606655 bp 4 RT 4: 1661181-1665155 bp 5 RT 5: 1769922-1775933 bp 6 RT 6: 1843301-1846929 bp 7 RT 7: 2039901-2045269 bp 8 RT 8: 2225832-2232209 bp 9 RT 9: 4031508-4037878 bp 10 RT 10: 4679311-4684468 bp 11 RT 11: 4838368-4844170 bp 12 RT 12: 5117121-5122798 bp 13 RT 13: 5127474-5136259 bp 14 RT 14: 5393998-5399047 bp 15 RT 15: 5587035-5591844 bp 16 RT 16: 5811210-5814322 bp 17 RT 17: 5846023-5852107 bp 18 RT 18: 6283559-6286834 bp Neighborhood of RT #1 [29493, 34248] DUF2160 UgpB RVT-GII GIIM YiaG RelE Neighborhood of RT #2 [330051, 335005] LolD TetR_N TetR_C_30 RVT-GII GIIM YccC Neighborhood of RT #3 [1601088, 1606717] RVT-GII PRK09413 PRK14702 RVT_N RVT-GII nitrilase IstB_IS21 Neighborhood of RT #4 [1661181, 1665199] COG3531 YceA RVT-GII GIIM BolA Neighborhood of RT #5 [1769922, 1775933] KdpD PRK10529 RVT-GII GIIM Neighborhood of RT #6 [1843301, 1846970] PaaI RVT-GII GIIM COG3821 Neighborhood of RT #7 [2039901, 2045271] PRK05420 COG3146 RVT-GII GIIM OprP Neighborhood of RT #8 [2225832, 2232209] PitA RVT-GII GIIM RVT-GII GIIM Neighborhood of RT #9 [4031508, 4037883] trxA Rho RVT-GII GIIM PRK10922 PRK07609 Neighborhood of RT #10 [4679311, 4684479] AppB DUF2474 RVT-GII GIIM PRK15001 PRK10188 Neighborhood of RT #11 [4838368, 4844181] YjgA PRK11040 RVT-GII GIIM fumC Neighborhood of RT #12 [5117121, 5122798] MotY_N OmpA_C-like PLN00200 RVT-GII GIIM CitB Neighborhood of RT #13 [5127474, 5136267] metG PRK11670 RVT-GII GIIM PreA DUF3470 mutS1 Neighborhood of RT #14 [5393998, 5399088] PRK10700 RVT-GII GIIM PRK10238 Neighborhood of RT #15 [5587035, 5591900] KOG3180 KOG3954 RVT-GII GIIM PBP2_HisK DUF4398 Neighborhood of RT #16 [5811210, 5814345] RVT-GII GIIM PRK10562 Neighborhood of RT #17 [5846023, 5852148] PRK10550 PRK10743 RVT-GII GIIM Tra8 Tra8 Neighborhood of RT #18 [6283559, 6286834] RVT-GII GIIM Feature: gene Location: 29493-29768 bp Feature: domain Description: DUF2160 Location: 29505-29766 bp Feature: domain Description: DUF2 160 Location: 2 9505-2 9766 bp Feature: gene Location: 29844-31586 bp Feature: domain Description: UgpB Location: 29886-31410 bp Feature: domain Description: UgpB Location: 2 9886-31410 bp Feature: gene Location: 32060-33481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32417-33032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 417-33032 bp Feature: domain Description: GIIM Note: maturase Location: 33089-33302 bp Feature: domain Description: GIIM Note: maturase Location: 33089-33302 bp Feature: gene Location: 33593-33907 bp Feature: domain Description: YiaG Location: 33641-33884 bp Feature: domain Description: YiaG Location: 33641-33884 bp Feature: gene Location: 33904-34248 bp Feature: domain Description: RelE Location: 34036-34213 bp Feature: domain Description: RelE Location: 34036-342 13 bp Feature: gene Location: 330051-330839 bp Feature: domain Description: LolD Location: 330168-330819 bp Feature: domain Description: LolD Location: 330168-330819 bp Feature: gene Location: 331113-331868 bp Feature: domain Description: TetR_N Location: 331161-331293 bp Feature: domain Description: TetR_N Location: 331161-3312 93 bp Feature: domain Description: TetR_C_30 Location: 331431-331749 bp Feature: domain Description: TetR_C_30 Location: 331431-331749 bp Feature: gene Location: 331952-333373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332309-332924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 309-332 92 4 bp Feature: domain Description: GIIM Note: maturase Location: 332981-333194 bp Feature: domain Description: GIIM Note: maturase Location: 332 981-333194 bp Feature: gene Location: 333523-333693 bp Feature: gene Location: 333941-335005 bp Feature: domain Description: YccC Location: 333968-334988 bp Feature: domain Description: YccC Location: 333968-334988 bp Feature: gene Location: 1601088-1601522 bp Feature: gene Location: 1601486-1601728 bp Feature: gene Location: 1601786-1602061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1601966-1602032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1601966-1602 032 bp Feature: gene Location: 1602112-1602465 bp Feature: domain Description: PRK09413 Location: 1602151-1602463 bp Feature: domain Description: PRK09413 Location: 1602 151-1602 463 bp Feature: gene Location: 1602585-1603325 bp Feature: domain Description: PRK14702 Location: 1602591-1603308 bp Feature: domain Description: PRK14702 Location: 1602 591-1603308 bp Feature: gene Location: 1604235-1604381 bp Feature: domain Description: RVT_N Location: 1604244-1604373 bp Feature: domain Description: RVT_N Location: 16042 44-1604373 bp Feature: gene Location: 1604458-1604640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1604461-1604638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1604461-1604638 bp Feature: gene Location: 1604982-1605827 bp Feature: domain Description: nitrilase Location: 1605012-1605741 bp Feature: domain Description: nitrilase Location: 1605012 -1605741 bp Feature: gene Location: 1605974-1606717 bp Feature: domain Description: IstB_IS21 Location: 1606133-1606655 bp Feature: domain Description: IstB_IS2 1 Location: 1606133-1606655 bp Feature: gene Location: 1661181-1661816 bp Feature: domain Description: COG3531 Location: 1661190-1661805 bp Feature: domain Description: COG3531 Location: 1661190-1661805 bp Feature: gene Location: 1661820-1662761 bp Feature: domain Description: YceA Location: 1661823-1662714 bp Feature: domain Description: YceA Location: 166182 3-1662 714 bp Feature: gene Location: 1662879-1664300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1663236-1663851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16632 36-1663851 bp Feature: domain Description: GIIM Note: maturase Location: 1663908-1664121 bp Feature: domain Description: GIIM Note: maturase Location: 1663908-166412 1 bp Feature: gene Location: 1664450-1664620 bp Feature: gene Location: 1664906-1665199 bp Feature: domain Description: BolA Location: 1664909-1665155 bp Feature: domain Description: BolA Location: 1664909-1665155 bp Feature: gene Location: 1769922-1772570 bp Feature: domain Description: KdpD Location: 1769940-1772559 bp Feature: domain Description: KdpD Location: 1769940-1772 559 bp Feature: gene Location: 1772570-1773262 bp Feature: domain Description: PRK10529 Location: 1772582-1773254 bp Feature: domain Description: PRK1052 9 Location: 1772 582 -17732 54 bp Feature: gene Location: 1773956-1775377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1774313-1774928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1774313-177492 8 bp Feature: domain Description: GIIM Note: maturase Location: 1774985-1775198 bp Feature: domain Description: GIIM Note: maturase Location: 1774985-1775198 bp Feature: gene Location: 1775527-1775697 bp Feature: gene Location: 1775748-1775933 bp Feature: gene Location: 1843301-1843777 bp Feature: domain Description: PaaI Location: 1843316-1843724 bp Feature: domain Description: PaaI Location: 1843316-184372 4 bp Feature: gene Location: 1843837-1844052 bp Feature: gene Location: 1844283-1845704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1844640-1845255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1844640-18452 55 bp Feature: domain Description: GIIM Note: maturase Location: 1845312-1845525 bp Feature: domain Description: GIIM Note: maturase Location: 1845312 -184552 5 bp Feature: gene Location: 1845854-1846024 bp Feature: gene Location: 1846230-1846970 bp Feature: domain Description: COG3821 Location: 1846254-1846929 bp Feature: domain Description: COG382 1 Location: 18462 54-184692 9 bp Feature: gene Location: 2039901-2040602 bp Feature: domain Description: PRK05420 Location: 2039913-2040594 bp Feature: domain Description: PRK0542 0 Location: 2 039913-2 040594 bp Feature: gene Location: 2040729-2041853 bp Feature: domain Description: COG3146 Location: 2040741-2041851 bp Feature: domain Description: COG3146 Location: 2 040741-2 041851 bp Feature: gene Location: 2041999-2043420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042356-2042971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 042 356-2 042 971 bp Feature: domain Description: GIIM Note: maturase Location: 2043028-2043241 bp Feature: domain Description: GIIM Note: maturase Location: 2 04302 8-2 0432 41 bp Feature: gene Location: 2043570-2043740 bp Feature: gene Location: 2043937-2045271 bp Feature: domain Description: OprP Location: 2043940-2045269 bp Feature: domain Description: OprP Location: 2 043940-2 0452 69 bp Feature: gene Location: 2225832-2226101 bp Feature: gene Location: 2226433-2227908 bp Feature: domain Description: PitA Location: 2226475-2227894 bp Feature: domain Description: PitA Location: 2 2 2 6475-2 2 2 7894 bp Feature: gene Location: 2228066-2229358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2228327-2228939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 832 7-2 2 2 8939 bp Feature: domain Description: GIIM Note: maturase Location: 2228996-2229218 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 2 8996-2 2 2 92 18 bp Feature: gene Location: 2229881-2231302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2230238-2230853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 302 38-2 2 30853 bp Feature: domain Description: GIIM Note: maturase Location: 2230910-2231123 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 30910-2 2 3112 3 bp Feature: gene Location: 2231452-2231622 bp Feature: gene Location: 2232051-2232209 bp Feature: gene Location: 4031508-4031879 bp Feature: domain Description: trxA Location: 4031562-4031877 bp Feature: domain Description: trxA Location: 4031562 -4031877 bp Feature: gene Location: 4032112-4033371 bp Feature: domain Description: Rho Location: 4032115-4033366 bp Feature: domain Description: Rho Location: 4032 115-4033366 bp Feature: gene Location: 4033851-4035272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4034208-4034823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40342 08-403482 3 bp Feature: domain Description: GIIM Note: maturase Location: 4034880-4035093 bp Feature: domain Description: GIIM Note: maturase Location: 4034880-4035093 bp Feature: gene Location: 4035449-4036915 bp Feature: domain Description: PRK10922 Location: 4035452-4036910 bp Feature: domain Description: PRK1092 2 Location: 4035452 -4036910 bp Feature: gene Location: 4036915-4037883 bp Feature: domain Description: PRK07609 Location: 4036918-4037878 bp Feature: domain Description: PRK07609 Location: 4036918-4037878 bp Feature: gene Location: 4679311-4680318 bp Feature: domain Description: AppB Location: 4679323-4680316 bp Feature: domain Description: AppB Location: 467932 3-4680316 bp Feature: gene Location: 4680331-4680498 bp Feature: domain Description: DUF2474 Location: 4680379-4680493 bp Feature: domain Description: DUF2 474 Location: 4680379-4680493 bp Feature: gene Location: 4680969-4682390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4681326-4681941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468132 6-4681941 bp Feature: domain Description: GIIM Note: maturase Location: 4681998-4682211 bp Feature: domain Description: GIIM Note: maturase Location: 4681998-4682 2 11 bp Feature: gene Location: 4682468-4683592 bp Feature: domain Description: PRK15001 Location: 4682474-4683590 bp Feature: domain Description: PRK15001 Location: 4682 474-4683590 bp Feature: gene Location: 4683769-4684479 bp Feature: domain Description: PRK10188 Location: 4683778-4684468 bp Feature: domain Description: PRK10188 Location: 4683778-4684468 bp Feature: gene Location: 4838368-4838889 bp Feature: domain Description: YjgA Location: 4838401-4838881 bp Feature: domain Description: YjgA Location: 4838401-4838881 bp Feature: gene Location: 4838998-4840344 bp Feature: domain Description: PRK11040 Location: 4839040-4840339 bp Feature: domain Description: PRK11040 Location: 4839040-4840339 bp Feature: gene Location: 4840824-4842245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4841181-4841796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4841181-4841796 bp Feature: domain Description: GIIM Note: maturase Location: 4841853-4842066 bp Feature: domain Description: GIIM Note: maturase Location: 4841853-4842 066 bp Feature: gene Location: 4842417-4842812 bp Feature: gene Location: 4842805-4844181 bp Feature: domain Description: fumC Location: 4842811-4844170 bp Feature: domain Description: fumC Location: 4842 811-4844170 bp Feature: gene Location: 5117121-5118029 bp Feature: domain Description: MotY_N Location: 5117187-5117616 bp Feature: domain Description: MotY_N Location: 5117187-5117616 bp Feature: domain Description: OmpA_C-like Location: 5117646-5117955 bp Feature: domain Description: OmpA_C-like Location: 5117646-5117955 bp Feature: gene Location: 5118158-5119375 bp Feature: domain Description: PLN00200 Location: 5118167-5119358 bp Feature: domain Description: PLN002 00 Location: 5118167-5119358 bp Feature: gene Location: 5119856-5121277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5120213-5120828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512 02 13-512 082 8 bp Feature: domain Description: GIIM Note: maturase Location: 5120885-5121098 bp Feature: domain Description: GIIM Note: maturase Location: 512 0885-512 1098 bp Feature: gene Location: 5121922-5122554 bp Feature: domain Description: CitB Location: 5121931-5122552 bp Feature: domain Description: CitB Location: 512 1931-512 2 552 bp Feature: gene Location: 5122616-5122798 bp Feature: gene Location: 5127474-5129525 bp Feature: domain Description: metG Location: 5127489-5129523 bp Feature: domain Description: metG Location: 512 7489-512 952 3 bp Feature: gene Location: 5129697-5130791 bp Feature: domain Description: PRK11670 Location: 5129709-5130744 bp Feature: domain Description: PRK11670 Location: 512 9709-5130744 bp Feature: gene Location: 5131266-5132687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5131623-5132238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513162 3-5132 2 38 bp Feature: domain Description: GIIM Note: maturase Location: 5132295-5132508 bp Feature: domain Description: GIIM Note: maturase Location: 5132 2 95-5132 508 bp Feature: gene Location: 5133210-5133533 bp Feature: domain Description: PreA Location: 5133222-5133399 bp Feature: domain Description: PreA Location: 51332 2 2 -5133399 bp Feature: domain Description: DUF3470 Location: 5133408-5133531 bp Feature: domain Description: DUF3470 Location: 5133408-5133531 bp Feature: gene Location: 5133676-5136267 bp Feature: domain Description: mutS1 Location: 5133709-5136259 bp Feature: domain Description: mutS1 Location: 5133709-51362 59 bp Feature: gene Location: 5393998-5395236 bp Feature: domain Description: PRK10700 Location: 5394046-5394880 bp Feature: domain Description: PRK10700 Location: 5394046-5394880 bp Feature: gene Location: 5395293-5395424 bp Feature: gene Location: 5395741-5397162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5396098-5396713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5396098-5396713 bp Feature: domain Description: GIIM Note: maturase Location: 5396770-5396983 bp Feature: domain Description: GIIM Note: maturase Location: 5396770-5396983 bp Feature: gene Location: 5397477-5397617 bp Feature: gene Location: 5397667-5399088 bp Feature: domain Description: PRK10238 Location: 5397685-5399047 bp Feature: domain Description: PRK102 38 Location: 5397685-5399047 bp Feature: gene Location: 5587035-5587784 bp Feature: domain Description: KOG3180 Location: 5587038-5587779 bp Feature: domain Description: KOG3180 Location: 5587038-5587779 bp Feature: gene Location: 5587787-5588716 bp Feature: domain Description: KOG3954 Location: 5587793-5588708 bp Feature: domain Description: KOG3954 Location: 5587793-5588708 bp Feature: gene Location: 5589196-5590617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5589553-5590168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5589553-5590168 bp Feature: domain Description: GIIM Note: maturase Location: 5590225-5590438 bp Feature: domain Description: GIIM Note: maturase Location: 55902 2 5-5590438 bp Feature: gene Location: 5590719-5591534 bp Feature: domain Description: PBP2_HisK Location: 5590797-5591457 bp Feature: domain Description: PBP2 _HisK Location: 5590797-5591457 bp Feature: gene Location: 5591544-5591900 bp Feature: domain Description: DUF4398 Location: 5591622-5591844 bp Feature: domain Description: DUF4398 Location: 559162 2 -5591844 bp Feature: gene Location: 5811210-5811425 bp Feature: gene Location: 5811476-5811646 bp Feature: gene Location: 5811796-5813217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5812153-5812768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5812 153-5812 768 bp Feature: domain Description: GIIM Note: maturase Location: 5812825-5813038 bp Feature: domain Description: GIIM Note: maturase Location: 5812 82 5-5813038 bp Feature: gene Location: 5813307-5813867 bp Feature: gene Location: 5813908-5814345 bp Feature: domain Description: PRK10562 Location: 5813911-5814322 bp Feature: domain Description: PRK10562 Location: 5813911-581432 2 bp Feature: gene Location: 5846023-5846982 bp Feature: domain Description: PRK10550 Location: 5846026-5846950 bp Feature: domain Description: PRK10550 Location: 584602 6-5846950 bp Feature: gene Location: 5847100-5847549 bp Feature: domain Description: PRK10743 Location: 5847112-5847520 bp Feature: domain Description: PRK10743 Location: 5847112 -584752 0 bp Feature: gene Location: 5848037-5849458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5848394-5849009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5848394-5849009 bp Feature: domain Description: GIIM Note: maturase Location: 5849066-5849279 bp Feature: domain Description: GIIM Note: maturase Location: 5849066-58492 79 bp Feature: gene Location: 5850033-5850995 bp Feature: domain Description: Tra8 Location: 5850036-5850966 bp Feature: domain Description: Tra8 Location: 5850036-5850966 bp Feature: gene Location: 5851120-5852148 bp Feature: domain Description: Tra8 Location: 5851123-5852107 bp Feature: domain Description: Tra8 Location: 585112 3-5852 107 bp Feature: gene Location: 6283559-6284062 bp Feature: gene Location: 6284052-6284279 bp Feature: gene Location: 6284596-6286017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6284953-6285568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 84953-62 85568 bp Feature: domain Description: GIIM Note: maturase Location: 6285625-6285838 bp Feature: domain Description: GIIM Note: maturase Location: 62 8562 5-62 85838 bp Feature: gene Location: 6286116-6286280 bp Feature: gene Location: 6286556-6286834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT