myRT

myRT report for GCA_900101295.1_IMG-taxon_2606217764_annotated_assembly

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Seq: FOIL01000005.1 (106857 bp)
Overview 1 RT 1: 98077-106854 bp Neighborhood of RT #1 [98077, 106854] SMC_prok_B Smc SMC_prok_B VbhA_like FIDO COG2865 RVT-UG17 Feature: gene Location: 98077-102459 bp Feature: domain Description: SMC_prok_B Location: 98779-99187 bp Feature: domain Description: SMC_prok_B Location: 98779-991 87 bp Feature: domain Description: Smc Location: 99187-99991 bp Feature: domain Description: Smc Location: 991 87-99991 bp Feature: domain Description: SMC_prok_B Location: 100339-100987 bp Feature: domain Description: SMC_prok_B Location: 1 00339-1 00987 bp Feature: gene Location: 102961-104037 bp Feature: domain Description: VbhA_like Location: 103012-103171 bp Feature: domain Description: VbhA_like Location: 1 0301 2-1 031 71 bp Feature: domain Description: FIDO Location: 103198-103741 bp Feature: domain Description: FIDO Location: 1 031 98-1 03741 bp Feature: domain Description: COG2865 Location: 103786-104029 bp Feature: domain Description: COG2865 Location: 1 03786-1 04029 bp Feature: gene Location: 104360-104617 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 104498-104588 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 04498-1 04588 bp Feature: gene Location: 104769-106532 bp Feature: gene Location: 106717-106854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), Smc (COG1196), VbhA_like (cl17006), FIDO (COG2184), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG17

Seq: FOIL01000020.1 (49281 bp)
Overview 1 RT 1: 20889-28163 bp Neighborhood of RT #1 [20889, 28168] acetolactate_decarboxylase cNMP_binding RVT-UG26 NHLM_micro_ABC1 NHLM_micro_ABC2 Feature: gene Location: 20889-21674 bp Feature: domain Description: acetolactate_decarboxylase Location: 20964-21663 bp Feature: domain Description: acetolactate_decarboxylase Location: 2 0964-2 1663 bp Feature: gene Location: 21796-22311 bp Feature: domain Description: cNMP_binding Location: 21829-22081 bp Feature: domain Description: cNMP_binding Location: 2 182 9-2 2 081 bp Feature: gene Location: 22323-23540 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 22548-23157 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 2 2 548-2 3157 bp Feature: gene Location: 23872-25992 bp Feature: domain Description: NHLM_micro_ABC1 Location: 23878-25987 bp Feature: domain Description: NHLM_micro_ABC1 Location: 2 3878-2 5987 bp Feature: gene Location: 26003-28168 bp Feature: domain Description: NHLM_micro_ABC2 Location: 26279-28163 bp Feature: domain Description: NHLM_micro_ABC2 Location: 2 62 79-2 8163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT acetolactate_decarboxylase (cd17299), cNMP_binding (pfam00027), RVT-UG26, NHLM_micro_ABC1 (TIGR03796), NHLM_micro_ABC2 (TIGR03797)

Seq: FOIL01000107.1 (1652 bp)
Overview 1 RT 1: 3-1410 bp Neighborhood of RT #1 [3, 1586] RVT-GII GIIM Feature: gene Location: 3-128 bp Feature: gene Location: 171-1586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-113 7 bp Feature: domain Description: GIIM Note: maturase Location: 1191-1410 bp Feature: domain Description: GIIM Note: maturase Location: 1191-1410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)