myRT

myRT report for GCA_900101315.1_IMG-taxon_2593339257_annotated_assembly

Download annotations/find similar RTs

Seq: FMUW01000021.1 (53291 bp)
Overview 1 RT 1: 1-3991 bp Neighborhood of RT #1 [1, 4035] RVT-GII VirD4 DUF3801 Feature: gene Location: 1-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-805 bp Feature: gene Location: 1456-2829 bp Feature: domain Description: VirD4 Location: 1606-2800 bp Feature: domain Description: VirD4 Location: 1 606-2800 bp Feature: gene Location: 2872-4035 bp Feature: domain Description: DUF3801 Location: 2971-3991 bp Feature: domain Description: DUF3801 Location: 2971 -3991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)

Seq: FMUW01000054.1 (12124 bp)
Overview 1 RT 1: 2-4410 bp Neighborhood of RT #1 [2, 4802] RVT-GII Intron_maturas2 HNHc KOG1000 YodL LPD16 DUF4316 LPD25 Feature: gene Location: 2-847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-116 bp Feature: domain Description: Intron_maturas2 Location: 191-623 bp Feature: domain Description: Intron_maturas2 Location: 191-62 3 bp Feature: domain Description: HNHc Note: nucleases Location: 674-818 bp Feature: domain Description: HNHc Note: nucleases Location: 674-818 bp Feature: gene Location: 907-1965 bp Feature: domain Description: KOG1000 Location: 955-1135 bp Feature: domain Description: KOG1000 Location: 955-1135 bp Feature: gene Location: 2046-4802 bp Feature: domain Description: YodL Location: 2826-3120 bp Feature: domain Description: YodL Location: 2 82 6-312 0 bp Feature: domain Description: LPD16 Location: 3150-3372 bp Feature: domain Description: LPD16 Location: 3150-3372 bp Feature: domain Description: DUF4316 Location: 3420-3507 bp Feature: domain Description: DUF4316 Location: 342 0-3507 bp Feature: domain Description: LPD25 Location: 4113-4410 bp Feature: domain Description: LPD2 5 Location: 4113-4410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), YodL (pfam14191), LPD16 (pfam18830), DUF4316 (pfam14195), LPD25 (pfam18840)

Seq: FMUW01000059.1 (7191 bp)
Overview 1 RT 1: 2-2697 bp Neighborhood of RT #1 [2, 2697] RVT-GII Intron_maturas2 Feature: gene Location: 2-1402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-683 bp Feature: domain Description: Intron_maturas2 Location: 761-1064 bp Feature: domain Description: Intron_maturas2 Location: 761-1064 bp Feature: gene Location: 1666-2247 bp Feature: gene Location: 2359-2697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: FMUW01000065.1 (5945 bp)
Overview 1 RT 1: 2-2273 bp Neighborhood of RT #1 [2, 2278] RVT-GII Intron_maturas2 Maff2 Feature: gene Location: 2-1402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-683 bp Feature: domain Description: Intron_maturas2 Location: 761-1064 bp Feature: domain Description: Intron_maturas2 Location: 761-1064 bp Feature: gene Location: 1666-1935 bp Feature: gene Location: 2063-2278 bp Feature: domain Description: Maff2 Location: 2066-2273 bp Feature: domain Description: Maff2 Location: 2066-2273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Maff2 (pfam12750)

Seq: FMUW01000077.1 (1157 bp)
Overview 1 RT 1: 1-1048 bp Neighborhood of RT #1 [1, 1155] RVT-GII Feature: gene Location: 1-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-1048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-1048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FMUW01000067.1 (2777 bp)
Overview 1 RT 1: 181-1795 bp Neighborhood of RT #1 [181, 2670] RVT-GII Feature: gene Location: 181-312 bp Feature: gene Location: 470-670 bp Feature: gene Location: 697-2670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FMUW01000044.1 (21986 bp)
Overview 1 RT 1: 18544-21873 bp Neighborhood of RT #1 [18544, 21983] DUF3801 T4SS-DNA_transf RVT-GII Feature: gene Location: 18544-19107 bp Feature: domain Description: DUF3801 Location: 18736-19087 bp Feature: domain Description: DUF3801 Location: 187 36-19087 bp Feature: gene Location: 19107-20531 bp Feature: domain Description: T4SS-DNA_transf Location: 19530-20496 bp Feature: domain Description: T4SS-DNA_transf Location: 19530-20496 bp Feature: gene Location: 21072-21983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21351-21873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21351-2187 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), T4SS-DNA_transf (pfam02534), RVT-GII

Seq: FMUW01000068.1 (1907 bp)
Overview 1 RT 1: 2-1656 bp Neighborhood of RT #1 [2, 1835] RVT-GII GIIM Feature: gene Location: 2-187 bp Feature: gene Location: 444-1835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-138 3 bp Feature: domain Description: GIIM Note: maturase Location: 1440-1656 bp Feature: domain Description: GIIM Note: maturase Location: 1440-1656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)