myRT

myRT report for GCA_900102385.1_IMG-taxon_2654588178_annotated_assembly

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Seq: FNBQ01000003.1 (184530 bp)
Overview 1 RT 1: 165396-171612 bp Neighborhood of RT #1 [165396, 171612] PRK05198 kpsF RVT-Retrons 2-Hacid_dh_4 Feature: gene Location: 165396-166157 bp Feature: domain Description: PRK05198 Location: 165405-166149 bp Feature: domain Description: PRK051 98 Location: 1 65405-1 661 49 bp Feature: gene Location: 166165-167115 bp Feature: domain Description: kpsF Location: 166291-167092 bp Feature: domain Description: kpsF Location: 1 66291 -1 67092 bp Feature: gene Location: 167176-168612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 167440-168022 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 67440-1 68022 bp Feature: gene Location: 168873-169835 bp Feature: domain Description: 2-Hacid_dh_4 Location: 168882-169803 bp Feature: domain Description: 2-Hacid_dh_4 Location: 1 68882-1 69803 bp Feature: gene Location: 169987-171612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05198 (2-dehydro-3-deoxyphosphooctonate aldolase; Provisional), kpsF (TIGR00393), RVT-Retrons, 2-Hacid_dh_4 (cd12162)

Seq: FNBQ01000001.1 (239061 bp)
Overview 1 RT 1: 39206-45328 bp Neighborhood of RT #1 [39206, 45328] TIGR00376 RVT-GII GIIM Feature: gene Location: 39206-43090 bp Feature: domain Description: TIGR00376 Location: 41573-43040 bp Feature: domain Description: TIGR00376 Location: 41573-43040 bp Feature: gene Location: 43163-43669 bp Feature: gene Location: 43842-44447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43881-43995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43881-43995 bp Feature: domain Description: GIIM Note: maturase Location: 44052-44262 bp Feature: domain Description: GIIM Note: maturase Location: 44052 -442 62 bp Feature: gene Location: 44571-44720 bp Feature: gene Location: 44930-45328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00376 (DNA helicase, putative), RVT-GII, GIIM (pfam08388)

Seq: FNBQ01000028.1 (49496 bp)
Overview 1 RT 1: 28766-35202 bp Neighborhood of RT #1 [28766, 35219] ALP_N-acyl_transferase group_II_RT_mat RVT-UG6 GT4_WcaC-like Feature: gene Location: 28766-29380 bp Feature: gene Location: 29384-30268 bp Feature: domain Description: ALP_N-acyl_transferase Location: 29399-29888 bp Feature: domain Description: ALP_N-acyl_transferase Location: 293 99-29888 bp Feature: gene Location: 30270-33533 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 30306-30648 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3 03 06-3 0648 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 30909-31362 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 3 0909-3 13 62 bp Feature: gene Location: 33553-33765 bp Feature: gene Location: 33954-35219 bp Feature: domain Description: GT4_WcaC-like Location: 33957-35202 bp Feature: domain Description: GT4_WcaC-like Location: 3 3 957-3 5202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALP_N-acyl_transferase (cd07571), group_II_RT_mat (TIGR04416), RVT-UG6, GT4_WcaC-like (cd03825)