myRT

myRT report for GCA_900102545.1_IMG-taxon_2634166296_annotated_assembly

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Seq: FNBN01000008.1 (408002 bp)
Overview 1 RT 1: 334330-340371 bp Neighborhood of RT #1 [334330, 342986] CypX RVT-Retrons WGR_DNA_ligase HEAT_2 Feature: gene Location: 334330-335448 bp Feature: domain Description: CypX Location: 334336-335437 bp Feature: domain Description: CypX Location: 334336-335437 bp Feature: gene Location: 335716-336078 bp Feature: gene Location: 336174-337682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336717-337335 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33671 7-337335 bp Feature: gene Location: 338117-339775 bp Feature: gene Location: 339786-342986 bp Feature: domain Description: WGR_DNA_ligase Location: 339801-340026 bp Feature: domain Description: WGR_DNA_ligase Location: 339801 -340026 bp Feature: domain Description: HEAT_2 Location: 340161-340371 bp Feature: domain Description: HEAT_2 Location: 3401 61 -340371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CypX (COG2124), RVT-Retrons, WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)

Seq: FNBN01000009.1 (396822 bp)
Overview 1 RT 1: 389749-394170 bp Neighborhood of RT #1 [389749, 394170] RVT-GII gag-asp_proteas clan_AA_DTGF Feature: gene Location: 389749-390339 bp Feature: gene Location: 390575-391198 bp Feature: gene Location: 391405-391575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391411-391531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391411-391531 bp Feature: gene Location: 392592-393551 bp Feature: domain Description: gag-asp_proteas Location: 392784-393045 bp Feature: domain Description: gag-asp_proteas Location: 392 784-393045 bp Feature: domain Description: clan_AA_DTGF Location: 393186-393468 bp Feature: domain Description: clan_AA_DTGF Location: 393186-393468 bp Feature: gene Location: 393853-394170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, gag-asp_proteas (pfam13975), clan_AA_DTGF

Seq: FNBN01000017.1 (62049 bp)
Overview 1 RT 1: 57001-62047 bp Neighborhood of RT #1 [57001, 62047] RVT-Retrons Feature: gene Location: 57001-58695 bp Feature: gene Location: 58878-60221 bp Feature: gene Location: 60391-61485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60610-61228 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60610-61228 bp Feature: gene Location: 61732-61890 bp Feature: gene Location: 61913-62047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons