myRT

myRT report for GCA_900102595.1_IMG-taxon_2623620521_annotated_assembly

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Seq: FOIM01000020.1 (112440 bp)
Overview 1 RT 1: 94210-99432 bp Neighborhood of RT #1 [94210, 99432] LivF URO-D_like RVT-GII GIIM COG3943 Feature: gene Location: 94210-94923 bp Feature: domain Description: LivF Location: 94216-94918 bp Feature: domain Description: LivF Location: 9421 6-9491 8 bp Feature: gene Location: 95082-96065 bp Feature: domain Description: URO-D_like Location: 95106-96018 bp Feature: domain Description: URO-D_like Location: 951 06-9601 8 bp Feature: gene Location: 96611-98002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96926-97553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96926-97553 bp Feature: domain Description: GIIM Note: maturase Location: 97610-97835 bp Feature: domain Description: GIIM Note: maturase Location: 9761 0-97835 bp Feature: gene Location: 98208-99230 bp Feature: domain Description: COG3943 Location: 98244-99195 bp Feature: domain Description: COG3943 Location: 98244-991 95 bp Feature: gene Location: 99265-99432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FOIM01000014.1 (136945 bp)
Overview 1 RT 1: 98126-102687 bp Neighborhood of RT #1 [98126, 102692] VirD4 RVT-GII Intron_maturas2 VirD4 Maff2 Feature: gene Location: 98126-98716 bp Feature: domain Description: VirD4 Location: 98243-98690 bp Feature: domain Description: VirD4 Location: 982 43-98690 bp Feature: gene Location: 98864-99328 bp Feature: gene Location: 99344-101134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99617-100427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99617-10042 7 bp Feature: domain Description: Intron_maturas2 Location: 100607-100793 bp Feature: domain Description: Intron_maturas2 Location: 100607-100793 bp Feature: gene Location: 101206-102387 bp Feature: domain Description: VirD4 Location: 101269-102220 bp Feature: domain Description: VirD4 Location: 1012 69-102 2 2 0 bp Feature: gene Location: 102477-102692 bp Feature: domain Description: Maff2 Location: 102480-102687 bp Feature: domain Description: Maff2 Location: 102 480-102 687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FOIM01000027.1 (88213 bp)
Overview 1 RT 1: 32-3543 bp 2 RT 2: 16379-23137 bp Neighborhood of RT #1 [32, 3575] RVT-GII VirD4 Neighborhood of RT #2 [16379, 23841] Resolvase Recombinase Zn_ribbon_recom Piwi_piwi-like_ProArk RVT-Retrons Trypsin_2 KAP_NTPase Feature: gene Location: 32-202 bp Feature: gene Location: 229-2136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-13 06 bp Feature: gene Location: 2307-2447 bp Feature: gene Location: 2781-3575 bp Feature: domain Description: VirD4 Location: 3018-3543 bp Feature: domain Description: VirD4 Location: 3 018-3 543 bp Feature: gene Location: 16379-17887 bp Feature: domain Description: Resolvase Location: 16406-16823 bp Feature: domain Description: Resolvase Location: 16406-16823 bp Feature: domain Description: Recombinase Location: 16916-17294 bp Feature: domain Description: Recombinase Location: 16916-17294 bp Feature: domain Description: Zn_ribbon_recom Location: 17339-17507 bp Feature: domain Description: Zn_ribbon_recom Location: 173 3 9-17507 bp Feature: gene Location: 17937-19115 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 18108-19062 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 18108-19062 bp Feature: gene Location: 19322-20986 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19472-20063 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19472-20063 bp Feature: domain Description: Trypsin_2 Location: 20480-20891 bp Feature: domain Description: Trypsin_2 Location: 20480-20891 bp Feature: gene Location: 21251-21610 bp Feature: gene Location: 21826-23841 bp Feature: domain Description: KAP_NTPase Location: 21994-23137 bp Feature: domain Description: KAP_NTPase Location: 21994-23 13 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT