myRT

myRT report for GCA_900103825.1_IMG-taxon_2615840634_annotated_assembly

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Seq: FNIF01000003.1 (371858 bp)
Overview 1 RT 1: 36684-40414 bp Neighborhood of RT #1 [36684, 40414] RVT-GII Feature: gene Location: 36684-37136 bp Feature: gene Location: 37191-37355 bp Feature: gene Location: 37410-39203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37701-38400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37701 -38400 bp Feature: gene Location: 39449-39613 bp Feature: gene Location: 39956-40414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FNIF01000017.1 (103387 bp)
Overview 1 RT 1: 45667-52853 bp Neighborhood of RT #1 [45667, 52933] RVT-Retrons rumA PRK13337 Feature: gene Location: 45667-46641 bp Feature: gene Location: 46634-48673 bp Feature: gene Location: 50002-50289 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50008-50281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50008-502 81 bp Feature: gene Location: 50411-51928 bp Feature: domain Description: rumA Location: 50561-51893 bp Feature: domain Description: rumA Location: 50561-51893 bp Feature: gene Location: 52016-52933 bp Feature: domain Description: PRK13337 Location: 52019-52853 bp Feature: domain Description: PRK13337 Location: 52 019-52 853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rumA (TIGR00479), PRK13337 (putative lipid kinase; Reviewed)

Seq: FNIF01000046.1 (14451 bp)
Overview 1 RT 1: 736-4345 bp Neighborhood of RT #1 [736, 4345] spore_ger_x_C RVT-GII Feature: gene Location: 736-933 bp Feature: gene Location: 930-1232 bp Feature: domain Description: spore_ger_x_C Location: 984-1212 bp Feature: domain Description: spore_ger_x_C Location: 984-1212 bp Feature: gene Location: 1991-2692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297-2606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297-2606 bp Feature: gene Location: 2752-3078 bp Feature: gene Location: 3239-4345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spore_ger_x_C (TIGR02887), RVT-GII

Seq: FNIF01000009.1 (182418 bp)
Overview 1 RT 1: 124676-129129 bp Neighborhood of RT #1 [124676, 129129] PRK00024 E1_enzyme_family RVT-GII Intron_maturas2 HNHc Feature: gene Location: 124676-125374 bp Feature: domain Description: PRK00024 Location: 124763-125369 bp Feature: domain Description: PRK00024 Location: 124 763-125369 bp Feature: gene Location: 125394-125819 bp Feature: domain Description: E1_enzyme_family Location: 125445-125727 bp Feature: domain Description: E1_enzyme_family Location: 1254 4 5-125727 bp Feature: gene Location: 126436-128244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126700-127525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126700-127525 bp Feature: domain Description: Intron_maturas2 Location: 127597-127873 bp Feature: domain Description: Intron_maturas2 Location: 127597-127873 bp Feature: domain Description: HNHc Note: nucleases Location: 128071-128215 bp Feature: domain Description: HNHc Note: nucleases Location: 128071-128215 bp Feature: gene Location: 128304-128825 bp Feature: gene Location: 128818-129129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), E1_enzyme_family (cl22428), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: FNIF01000002.1 (901098 bp)
Overview 1 RT 1: 53504-56176 bp Neighborhood of RT #1 [53504, 56176] HTH_MARR MFS_YfcJ_like RVT-GII Feature: gene Location: 53504-53953 bp Feature: domain Description: HTH_MARR Location: 53579-53873 bp Feature: domain Description: HTH_MARR Location: 5 35 79-5 3873 bp Feature: gene Location: 53950-55143 bp Feature: domain Description: MFS_YfcJ_like Location: 53998-55087 bp Feature: domain Description: MFS_YfcJ_like Location: 5 3998-5 5 087 bp Feature: gene Location: 55271-55558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55379-55541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 5 379-5 5 5 41 bp Feature: gene Location: 55805-55978 bp Feature: gene Location: 56003-56176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MARR (smart00347), MFS_YfcJ_like (cd17489), RVT-GII

Seq: FNIF01000014.1 (117616 bp)
Overview 1 RT 1: 522-2351 bp Neighborhood of RT #1 [522, 2374] RVT-GII GIIM Hyi Feature: gene Location: 522-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717-1338 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1530 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1530 bp Feature: gene Location: 1544-1678 bp Feature: gene Location: 2156-2374 bp Feature: domain Description: Hyi Location: 2165-2351 bp Feature: domain Description: Hyi Location: 216 5-2351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Hyi (COG3622)

Seq: FNIF01000012.1 (123339 bp)
Overview 1 RT 1: 13315-17308 bp Neighborhood of RT #1 [13315, 17538] RVT-GII RVT-GII GIIM GH130_BT3780-like Feature: gene Location: 13315-13458 bp Feature: gene Location: 13565-13762 bp Feature: gene Location: 13967-14425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14267-14417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14267 -14417 bp Feature: gene Location: 14518-15258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14521-14899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14521-14899 bp Feature: domain Description: GIIM Note: maturase Location: 14989-15196 bp Feature: domain Description: GIIM Note: maturase Location: 14989-15196 bp Feature: gene Location: 15498-15881 bp Feature: gene Location: 16432-17538 bp Feature: domain Description: GH130_BT3780-like Location: 17014-17308 bp Feature: domain Description: GH130_BT37 80-like Location: 17 014-17 308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GH130_BT3780-like (cd18610)