myRT

myRT report for GCA_900103865.1_IMG-taxon_2617270787_annotated_assembly

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Seq: FNII01000012.1 (119544 bp)
Overview 1 RT 1: 47605-55345 bp Neighborhood of RT #1 [47605, 55374] 6PGL PRK05722 RVT-GII GIIM Sugarporin_N LamB PBP2_TMBP Feature: gene Location: 47605-48270 bp Feature: domain Description: 6PGL Location: 47626-48265 bp Feature: domain Description: 6PGL Location: 47626-48265 bp Feature: gene Location: 48272-49777 bp Feature: domain Description: PRK05722 Location: 48320-49769 bp Feature: domain Description: PRK05722 Location: 48320-49769 bp Feature: gene Location: 50218-51606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50542-51157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50542-51 1 57 bp Feature: domain Description: GIIM Note: maturase Location: 51208-51430 bp Feature: domain Description: GIIM Note: maturase Location: 51 208-51 430 bp Feature: gene Location: 52154-53662 bp Feature: domain Description: Sugarporin_N Location: 52175-52325 bp Feature: domain Description: Sugarporin_N Location: 521 75-52325 bp Feature: domain Description: LamB Location: 52436-53660 bp Feature: domain Description: LamB Location: 52436-53660 bp Feature: gene Location: 54103-55374 bp Feature: domain Description: PBP2_TMBP Location: 54184-55345 bp Feature: domain Description: PBP2_TMBP Location: 541 84-55345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 6PGL (cd01400), PRK05722 (glucose-6-phosphate 1-dehydrogenase; Validated), RVT-GII, GIIM (pfam08388), Sugarporin_N (pfam11471), LamB (smart00281), PBP2_TMBP (cd14750)

Seq: FNII01000001.1 (419733 bp)
Overview 1 RT 1: 330699-337161 bp Neighborhood of RT #1 [330699, 337232] RMtype1_S_EcoKI-TRD2-CR2_like RVT-UG1 YozG Arm-DNA-bind_2 Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 330699-331034 bp Feature: gene Location: 331084-331296 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 331126-331246 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2 -CR2 _like Location: 33112 6-3312 46 bp Feature: gene Location: 331283-335257 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 331961-332525 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 331961-332 52 5 bp Feature: gene Location: 335440-335685 bp Feature: domain Description: YozG Location: 335446-335668 bp Feature: domain Description: YozG Location: 335446-335668 bp Feature: gene Location: 336069-337232 bp Feature: domain Description: Arm-DNA-bind_2 Location: 336072-336264 bp Feature: domain Description: Arm-DNA-bind_2 Location: 336072 -3362 64 bp Feature: domain Description: Phage_int_SAM_3 Location: 336333-336498 bp Feature: domain Description: Phage_int_SAM_3 Location: 336333-336498 bp Feature: domain Description: INT_ICEBs1_C_like Location: 336675-337161 bp Feature: domain Description: INT_ICEBs1_C_like Location: 336675-337161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoKI-TRD2-CR2_like (cd17261), RVT-UG1, YozG (COG3655), Arm-DNA-bind_2 (pfam12167), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)