myRT

myRT report for GCA_900103895.1_IMG-taxon_2693430035_annotated_assembly

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Seq: FNLG01000004.1 (285188 bp)
Overview 1 RT 1: 118101-121918 bp Neighborhood of RT #1 [118101, 121956] DUF5372 RVT-GII GIIM PepP Feature: gene Location: 118101-118448 bp Feature: gene Location: 118491-118766 bp Feature: domain Description: DUF5372 Location: 118509-118731 bp Feature: domain Description: DUF5372 Location: 1 1 8509-1 1 8731 bp Feature: gene Location: 118625-119830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118805-119423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8805-1 1 9423 bp Feature: domain Description: GIIM Note: maturase Location: 119504-119720 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 9504-1 1 9720 bp Feature: gene Location: 120271-120699 bp Feature: gene Location: 120769-121956 bp Feature: domain Description: PepP Location: 120823-121918 bp Feature: domain Description: PepP Location: 1 20823-1 21 91 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388), PepP (COG0006)

Seq: FNLG01000003.1 (521959 bp)
Overview 1 RT 1: 358060-365199 bp Neighborhood of RT #1 [358060, 365543] COG3547 PRK08788 RVT-GII GIIM RVT-CRISPR-like COG5001 FUSC_2 Feature: gene Location: 358060-359001 bp Feature: domain Description: COG3547 Location: 358084-358999 bp Feature: domain Description: COG3547 Location: 358084-358999 bp Feature: gene Location: 359202-359429 bp Feature: domain Description: PRK08788 Location: 359208-359406 bp Feature: domain Description: PRK08788 Location: 3592 08-359406 bp Feature: gene Location: 359636-361060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360017-360707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360017-360707 bp Feature: gene Location: 361458-361862 bp Feature: domain Description: GIIM Note: maturase Location: 361551-361758 bp Feature: domain Description: GIIM Note: maturase Location: 361551-361758 bp Feature: gene Location: 361861-362028 bp Feature: gene Location: 362040-362261 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 362061-362169 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 362 061-362 169 bp Feature: gene Location: 362265-364592 bp Feature: domain Description: COG5001 Location: 362766-364560 bp Feature: domain Description: COG5001 Location: 362 766-364560 bp Feature: gene Location: 364884-365543 bp Feature: domain Description: FUSC_2 Location: 364962-365199 bp Feature: domain Description: FUSC_2 Location: 364962 -365199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PRK08788 (enoyl-CoA hydratase; Validated), RVT-GII, GIIM (pfam08388), RVT-CRISPR, COG5001 (Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain ), FUSC_2 (pfam13515)

Seq: FNLG01000001.1 (9082653 bp)
Overview 1 RT 1: 2019079-2026757 bp 2 RT 2: 3387621-3392398 bp 3 RT 3: 3468051-3477720 bp 4 RT 4: 5530588-5535602 bp 5 RT 5: 6510519-6515187 bp 6 RT 6: 6711094-6716972 bp Neighborhood of RT #1 [2019079, 2026828] OYE_like_2_FMN RVT-GII GIIM CHD Arm-DNA-bind_3 INT_P4_C Neighborhood of RT #2 [3387621, 3392463] integrase_gron RVT-GII GIIM Adc RssA Neighborhood of RT #3 [3468051, 3477720] Spo0J RVT-GII GIIM COG2263 KOG1513 KOG1513 KOG1513 Neighborhood of RT #4 [5530588, 5535829] COG5588 RVT-GII GIIM Phage_int_SAM_4 INT_IntI_C Zn_Tnp_IS91 Y2_Tnp Neighborhood of RT #5 [6510519, 6515195] CoxL crotonase-like RVT-GII GIIM Cupin_7 MhpC Neighborhood of RT #6 [6711094, 6716995] Lpd RVT-GII EmrA Feature: gene Location: 2019079-2020347 bp Feature: domain Description: OYE_like_2_FMN Location: 2019094-2020090 bp Feature: domain Description: OYE_like_2_FMN Location: 2019094-2020090 bp Feature: gene Location: 2020761-2020958 bp Feature: gene Location: 2020894-2022285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021239-2021857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202123 9-2021857 bp Feature: domain Description: GIIM Note: maturase Location: 2021911-2022127 bp Feature: domain Description: GIIM Note: maturase Location: 2021911-2022127 bp Feature: gene Location: 2022580-2024013 bp Feature: domain Description: CHD Location: 2023492-2023996 bp Feature: domain Description: CHD Location: 2023 492-2023 996 bp Feature: gene Location: 2025572-2026828 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2025599-2025851 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2025599-2025851 bp Feature: domain Description: INT_P4_C Location: 2026244-2026757 bp Feature: domain Description: INT_P4_C Location: 2026244-2026757 bp Feature: gene Location: 3387621-3388184 bp Feature: domain Description: integrase_gron Location: 3387660-3388137 bp Feature: domain Description: integrase_gron Location: 3 3 87660-3 3 8813 7 bp Feature: gene Location: 3388642-3388839 bp Feature: gene Location: 3388775-3390166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3389120-3389738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 89120-3 3 8973 8 bp Feature: domain Description: GIIM Note: maturase Location: 3389792-3390008 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 89792-3 3 90008 bp Feature: gene Location: 3390420-3391178 bp Feature: domain Description: Adc Location: 3390423-3391161 bp Feature: domain Description: Adc Location: 3 3 90423 -3 3 91161 bp Feature: gene Location: 3391216-3392463 bp Feature: domain Description: RssA Location: 3391339-3392398 bp Feature: domain Description: RssA Location: 3 3 913 3 9-3 3 923 98 bp Feature: gene Location: 3468051-3468407 bp Feature: gene Location: 3468485-3470605 bp Feature: domain Description: Spo0J Location: 3468521-3469433 bp Feature: domain Description: Spo0J Location: 3 468521-3 46943 3 bp Feature: gene Location: 3470977-3472509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471280-3472000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 471280-3 472000 bp Feature: domain Description: GIIM Note: maturase Location: 3472081-3472309 bp Feature: domain Description: GIIM Note: maturase Location: 3 472081-3 4723 09 bp Feature: gene Location: 3473228-3477565 bp Feature: domain Description: COG2263 Location: 3473585-3473945 bp Feature: domain Description: COG2263 Location: 3 473 585-3 473 945 bp Feature: domain Description: KOG1513 Location: 3474479-3475730 bp Feature: domain Description: KOG1513 Location: 3 474479-3 47573 0 bp Feature: domain Description: KOG1513 Location: 3475925-3476873 bp Feature: domain Description: KOG1513 Location: 3 475925-3 476873 bp Feature: domain Description: KOG1513 Location: 3477119-3477263 bp Feature: domain Description: KOG1513 Location: 3 477119-3 477263 bp Feature: gene Location: 3477577-3477720 bp Feature: gene Location: 5530588-5530722 bp Feature: gene Location: 5530837-5531499 bp Feature: domain Description: COG5588 Location: 5530840-5531452 bp Feature: domain Description: COG5588 Location: 553 0840-553 1452 bp Feature: gene Location: 5531750-5533141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5532095-5532713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553 2095-553 2713 bp Feature: domain Description: GIIM Note: maturase Location: 5532767-5532983 bp Feature: domain Description: GIIM Note: maturase Location: 553 2767-553 2983 bp Feature: gene Location: 5533727-5534605 bp Feature: domain Description: Phage_int_SAM_4 Location: 5533754-5533988 bp Feature: domain Description: Phage_int_SAM_4 Location: 553 3 754-553 3 988 bp Feature: domain Description: INT_IntI_C Location: 5534033-5534522 bp Feature: domain Description: INT_IntI_C Location: 553 403 3 -553 4522 bp Feature: gene Location: 5534615-5535829 bp Feature: domain Description: Zn_Tnp_IS91 Location: 5534648-5534921 bp Feature: domain Description: Zn_Tnp_IS91 Location: 553 4648-553 4921 bp Feature: domain Description: Y2_Tnp Location: 5535047-5535602 bp Feature: domain Description: Y2_Tnp Location: 553 5047-553 5602 bp Feature: gene Location: 6510519-6510746 bp Feature: domain Description: CoxL Location: 6510621-6510744 bp Feature: domain Description: CoxL Location: 6510621-6510744 bp Feature: gene Location: 6510782-6511795 bp Feature: domain Description: crotonase-like Location: 6511037-6511610 bp Feature: domain Description: crotonase-like Location: 651103 7-6511610 bp Feature: gene Location: 6512498-6513763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6512702-6513359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6512702-6513 3 59 bp Feature: domain Description: GIIM Note: maturase Location: 6513437-6513650 bp Feature: domain Description: GIIM Note: maturase Location: 6513 43 7-6513 650 bp Feature: gene Location: 6513862-6514377 bp Feature: domain Description: Cupin_7 Location: 6513964-6514222 bp Feature: domain Description: Cupin_7 Location: 6513 964-6514222 bp Feature: gene Location: 6514374-6515195 bp Feature: domain Description: MhpC Location: 6514389-6515187 bp Feature: domain Description: MhpC Location: 65143 89-6515187 bp Feature: gene Location: 6711094-6712512 bp Feature: domain Description: Lpd Location: 6711166-6712504 bp Feature: domain Description: Lpd Location: 6711166-6712504 bp Feature: gene Location: 6713506-6713679 bp Feature: gene Location: 6714033-6715193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6714093-6714777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6714093 -6714777 bp Feature: gene Location: 6715192-6715389 bp Feature: gene Location: 6716027-6716995 bp Feature: domain Description: EmrA Location: 6716120-6716972 bp Feature: domain Description: EmrA Location: 6716120-6716972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OYE_like_2_FMN (cd04733), RVT-GII, GIIM (pfam08388), CHD (cd07302), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), integrase_gron (TIGR02249), Adc (COG4689), RssA (COG1752), Spo0J (COG1475)
COG2263 (Predicted RNA methylase ), KOG1513 (KOG1513, Nuclear helicase MOP-3/SNO (DEAD-box superfamily) ), COG5588 (Uncharacterized protein ), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), CoxL (COG1529), crotonase-like (cl23717), Cupin_7 (pfam12973)
MhpC (COG0596), Lpd (COG1249), EmrA (COG1566)