myRT

myRT report for GCA_900104095.1_IMG-taxon_2639762659_annotated_assembly

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Seq: FNJO01000019.1 (110749 bp)
Overview 1 RT 1: 29706-36001 bp Neighborhood of RT #1 [29706, 36006] argC_other RVT_N RVT-GII GIIM HNHc Nape_like_AP-endo pyrE Feature: gene Location: 29706-30170 bp Feature: gene Location: 30281-31228 bp Feature: domain Description: argC_other Location: 30290-31199 bp Feature: domain Description: argC_other Location: 30290-31 1 99 bp Feature: gene Location: 31369-33075 bp Feature: domain Description: RVT_N Location: 31426-31669 bp Feature: domain Description: RVT_N Location: 31 426-31 669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31714-32362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 71 4-32362 bp Feature: domain Description: GIIM Note: maturase Location: 32416-32647 bp Feature: domain Description: GIIM Note: maturase Location: 3241 6-32647 bp Feature: domain Description: HNHc Note: nucleases Location: 32866-33031 bp Feature: domain Description: HNHc Note: nucleases Location: 32866-33031 bp Feature: gene Location: 34522-35658 bp Feature: domain Description: Nape_like_AP-endo Location: 34888-35644 bp Feature: domain Description: Nape_like_AP-endo Location: 34888-35644 bp Feature: gene Location: 35329-36006 bp Feature: domain Description: pyrE Location: 35359-36001 bp Feature: domain Description: pyrE Location: 35359-36001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNJO01000011.1 (216120 bp)
Overview 1 RT 1: 58162-65115 bp Neighborhood of RT #1 [58162, 65120] type_IV_pilB PRK10888 RVT_N RVT-GII GIIM HNHc rplU Feature: gene Location: 58162-60057 bp Feature: domain Description: type_IV_pilB Location: 58345-60052 bp Feature: domain Description: type_IV_pilB Location: 58345-60052 bp Feature: gene Location: 60416-61393 bp Feature: domain Description: PRK10888 Location: 60455-61388 bp Feature: domain Description: PRK10888 Location: 60455-61388 bp Feature: gene Location: 61510-63063 bp Feature: domain Description: RVT_N Location: 61513-61663 bp Feature: domain Description: RVT_N Location: 61513-61663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61708-62356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61708-62 356 bp Feature: domain Description: GIIM Note: maturase Location: 62410-62641 bp Feature: domain Description: GIIM Note: maturase Location: 62 410-62 641 bp Feature: domain Description: HNHc Note: nucleases Location: 62866-63025 bp Feature: domain Description: HNHc Note: nucleases Location: 62 866-6302 5 bp Feature: gene Location: 64436-64594 bp Feature: gene Location: 64809-65120 bp Feature: domain Description: rplU Location: 64812-65115 bp Feature: domain Description: rplU Location: 64812 -65115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNJO01000001.1 (674798 bp)
Overview 1 RT 1: 33998-40913 bp 2 RT 2: 147750-154812 bp Neighborhood of RT #1 [33998, 40921] PRK06349 PRK09265 RVT-GII GIIM HNHc Xcc1710_like Bcp Neighborhood of RT #2 [147750, 154823] SPFH_HflC HflK_N SPFH_HflK RVT_N RVT-GII GIIM HNHc HflX hfq Feature: gene Location: 33998-35308 bp Feature: domain Description: PRK06349 Location: 34001-35297 bp Feature: domain Description: PRK063 49 Location: 3 4001-3 5297 bp Feature: gene Location: 35360-36589 bp Feature: domain Description: PRK09265 Location: 35363-36572 bp Feature: domain Description: PRK09265 Location: 3 53 63 -3 6572 bp Feature: gene Location: 36792-38129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36795-37398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6795-3 73 98 bp Feature: domain Description: GIIM Note: maturase Location: 37452-37683 bp Feature: domain Description: GIIM Note: maturase Location: 3 7452-3 7683 bp Feature: domain Description: HNHc Note: nucleases Location: 37908-38067 bp Feature: domain Description: HNHc Note: nucleases Location: 3 7908-3 8067 bp Feature: gene Location: 39767-40261 bp Feature: domain Description: Xcc1710_like Location: 39914-40238 bp Feature: domain Description: Xcc1710_like Location: 3 9914-4023 8 bp Feature: gene Location: 40460-40921 bp Feature: domain Description: Bcp Location: 40466-40913 bp Feature: domain Description: Bcp Location: 40466-40913 bp Feature: gene Location: 147750-148655 bp Feature: domain Description: SPFH_HflC Location: 147816-148566 bp Feature: domain Description: SPFH_HflC Location: 147816-148566 bp Feature: gene Location: 148667-150007 bp Feature: domain Description: HflK_N Location: 148760-148919 bp Feature: domain Description: HflK_N Location: 148760-148919 bp Feature: domain Description: SPFH_HflK Location: 148997-149822 bp Feature: domain Description: SPFH_HflK Location: 148997-149822 bp Feature: gene Location: 150130-151833 bp Feature: domain Description: RVT_N Location: 150187-150430 bp Feature: domain Description: RVT_N Location: 150187-15043 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150475-151123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150475-151123 bp Feature: domain Description: GIIM Note: maturase Location: 151177-151408 bp Feature: domain Description: GIIM Note: maturase Location: 151177-151408 bp Feature: domain Description: HNHc Note: nucleases Location: 151627-151792 bp Feature: domain Description: HNHc Note: nucleases Location: 151627-151792 bp Feature: gene Location: 153062-154333 bp Feature: domain Description: HflX Location: 153110-154184 bp Feature: domain Description: HflX Location: 153 110-154184 bp Feature: gene Location: 154584-154823 bp Feature: domain Description: hfq Location: 154593-154812 bp Feature: domain Description: hfq Location: 154593 -154812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNJO01000002.1 (653610 bp)
Overview 1 RT 1: 86666-94524 bp Neighborhood of RT #1 [86666, 94532] PRK09228 Delta12-FADS-like RVT_N RVT-GII GIIM HNHc Gdt1 COG3748 Feature: gene Location: 86666-88009 bp Feature: domain Description: PRK09228 Location: 86711-87986 bp Feature: domain Description: PRK09228 Location: 86711-87986 bp Feature: gene Location: 88184-89365 bp Feature: domain Description: Delta12-FADS-like Location: 88373-89189 bp Feature: domain Description: Delta12-FADS-like Location: 88373-89189 bp Feature: gene Location: 90584-92296 bp Feature: domain Description: RVT_N Location: 90641-90881 bp Feature: domain Description: RVT_N Location: 9064 1-90881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90929-91577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90929-91577 bp Feature: domain Description: GIIM Note: maturase Location: 91631-91862 bp Feature: domain Description: GIIM Note: maturase Location: 91631-91862 bp Feature: domain Description: HNHc Note: nucleases Location: 92084-92246 bp Feature: domain Description: HNHc Note: nucleases Location: 92084 -9224 6 bp Feature: gene Location: 92624-93199 bp Feature: domain Description: Gdt1 Location: 92627-93188 bp Feature: domain Description: Gdt1 Location: 92627-93188 bp Feature: gene Location: 93321-94532 bp Feature: domain Description: COG3748 Location: 93324-94524 bp Feature: domain Description: COG374 8 Location: 93324 -94 524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT