myRT

myRT report for GCA_900104185.1_IMG-taxon_2675903131_annotated_assembly

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Seq: FNIZ01000026.1 (58740 bp)
Overview 1 RT 1: 1-2423 bp Neighborhood of RT #1 [1, 2467] RVT-GII GIIM HesB_rel_seleno YdjM Feature: gene Location: 1-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-841 bp Feature: domain Description: GIIM Note: maturase Location: 895-1099 bp Feature: domain Description: GIIM Note: maturase Location: 895-1 099 bp Feature: gene Location: 1466-1750 bp Feature: domain Description: HesB_rel_seleno Location: 1475-1715 bp Feature: domain Description: HesB_rel_seleno Location: 1 475-1 71 5 bp Feature: gene Location: 1856-2467 bp Feature: domain Description: YdjM Location: 1859-2423 bp Feature: domain Description: YdjM Location: 1 859-2423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HesB_rel_seleno (TIGR01911), YdjM (pfam04307)

Seq: FNIZ01000004.1 (274621 bp)
Overview 1 RT 1: 66457-71043 bp 2 RT 2: 272169-274430 bp Neighborhood of RT #1 [66457, 71063] rumA RVT-UG28 DUF2187 Neighborhood of RT #2 [272169, 274618] NTase_sub_bind NT_KNTase_like RVT-GII GIIM Feature: gene Location: 66457-66741 bp Feature: domain Description: rumA Location: 66550-66730 bp Feature: domain Description: rumA Location: 66550-66730 bp Feature: gene Location: 67175-67978 bp Feature: gene Location: 68191-69690 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 68473-69112 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 68473-69112 bp Feature: gene Location: 70094-70516 bp Feature: gene Location: 70776-71063 bp Feature: domain Description: DUF2187 Location: 70869-71043 bp Feature: domain Description: DUF2 187 Location: 70869-71043 bp Feature: gene Location: 272169-272567 bp Feature: domain Description: NTase_sub_bind Location: 272187-272550 bp Feature: domain Description: NTase_sub_bind Location: 2 72 187-2 72 550 bp Feature: gene Location: 272543-272866 bp Feature: domain Description: NT_KNTase_like Location: 272573-272843 bp Feature: domain Description: NT_KNTase_like Location: 2 72 573-2 72 843 bp Feature: gene Location: 273335-274618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273557-274172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 73557-2 74172 bp Feature: domain Description: GIIM Note: maturase Location: 274226-274430 bp Feature: domain Description: GIIM Note: maturase Location: 2 742 2 6-2 74430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rumA (TIGR00479), RVT-UG28, DUF2187 (pfam09953), NTase_sub_bind (pfam08780), NT_KNTase_like (cd05403), RVT-GII, GIIM (pfam08388)

Seq: FNIZ01000025.1 (59838 bp)
Overview 1 RT 1: 24286-28668 bp Neighborhood of RT #1 [24286, 28691] RVT-GII HNHc 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like Feature: gene Location: 24286-24630 bp Feature: gene Location: 24868-25047 bp Feature: gene Location: 25176-26957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25434-26133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2543 4-2613 3 bp Feature: domain Description: HNHc Note: nucleases Location: 26688-26826 bp Feature: domain Description: HNHc Note: nucleases Location: 26688-26826 bp Feature: gene Location: 27272-27706 bp Feature: gene Location: 27753-28691 bp Feature: domain Description: 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like Location: 27909-28668 bp Feature: domain Description: 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like Location: 27909-28668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like (cd08255)

Seq: FNIZ01000043.1 (4716 bp)
Overview 1 RT 1: 362-4376 bp Neighborhood of RT #1 [362, 4376] RVT-GII HNHc Feature: gene Location: 362-652 bp Feature: gene Location: 816-1373 bp Feature: gene Location: 1388-3169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1646-2345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164 6-234 5 bp Feature: domain Description: HNHc Note: nucleases Location: 2900-3038 bp Feature: domain Description: HNHc Note: nucleases Location: 2900-3038 bp Feature: gene Location: 3484-3918 bp Feature: gene Location: 4008-4376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)