myRT

myRT report for GCA_900104415.1_IMG-taxon_2593339221_annotated_assembly

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Seq: FMXR01000022.1 (36383 bp)
Overview 1 RT 1: 9830-14704 bp Neighborhood of RT #1 [9830, 14704] RVT-UG24 HDc DUF1477 DUF1477 Feature: gene Location: 9830-10012 bp Feature: gene Location: 10117-10338 bp Feature: gene Location: 10351-13584 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 10846-11296 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 1 0846-1 1 296 bp Feature: domain Description: HDc Location: 12547-13069 bp Feature: domain Description: HDc Location: 1 2547-1 3069 bp Feature: gene Location: 13574-14077 bp Feature: domain Description: DUF1477 Location: 13637-13805 bp Feature: domain Description: DUF1 477 Location: 1 3637-1 3805 bp Feature: domain Description: DUF1477 Location: 13853-14027 bp Feature: domain Description: DUF1 477 Location: 1 3853-1 4027 bp Feature: gene Location: 14117-14704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, HDc (smart00471), DUF1477 (pfam07346)

Seq: FMXR01000006.1 (292926 bp)
Overview 1 RT 1: 2-2607 bp Neighborhood of RT #1 [2, 2609] RVT-GII GIIM PRK09261 PRK12548 Feature: gene Location: 2-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-12 2 bp Feature: domain Description: GIIM Note: maturase Location: 179-395 bp Feature: domain Description: GIIM Note: maturase Location: 179-395 bp Feature: gene Location: 702-1730 bp Feature: domain Description: PRK09261 Location: 708-1725 bp Feature: domain Description: PRK092 61 Location: 708-172 5 bp Feature: gene Location: 1743-2609 bp Feature: domain Description: PRK12548 Location: 1752-2607 bp Feature: domain Description: PRK12 548 Location: 1752 -2 607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09261 (phospho-2-dehydro-3-deoxyheptonate aldolase; Validated), PRK12548 (shikimate dehydrogenase)

Seq: FMXR01000029.1 (10803 bp)
Overview 1 RT 1: 8009-10801 bp Neighborhood of RT #1 [8009, 10800] RNase_Y RVT-GII Feature: gene Location: 8009-9556 bp Feature: domain Description: RNase_Y Location: 8039-9554 bp Feature: domain Description: RNase_Y Location: 803 9-9554 bp Feature: gene Location: 9854-10006 bp Feature: gene Location: 10066-10800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10384-10801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 84-10801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Y (TIGR03319), RVT-GII