myRT

myRT report for GCA_900104635.1_PRJEB16356

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Seq: FNWC01000005.1 (153956 bp)
Overview 1 RT 1: 82070-87450 bp Neighborhood of RT #1 [82070, 87512] HTH_XRE Rol_Rep_N Rep_trans FtsK RVT-GII FtsK_SpoIIIE Feature: gene Location: 82070-83266 bp Feature: domain Description: HTH_XRE Location: 82100-82244 bp Feature: domain Description: HTH_XRE Location: 821 00-82244 bp Feature: domain Description: Rol_Rep_N Location: 82280-82544 bp Feature: domain Description: Rol_Rep_N Location: 82280-82544 bp Feature: domain Description: Rep_trans Location: 82568-83183 bp Feature: domain Description: Rep_trans Location: 82568-831 83 bp Feature: gene Location: 83450-84154 bp Feature: domain Description: FtsK Location: 83651-84011 bp Feature: domain Description: FtsK Location: 83651 -8401 1 bp Feature: gene Location: 84174-85994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84474-85173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84474-851 73 bp Feature: gene Location: 86239-86382 bp Feature: gene Location: 86658-87512 bp Feature: domain Description: FtsK_SpoIIIE Location: 87309-87450 bp Feature: domain Description: FtsK_SpoIIIE Location: 87309-87450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNWC01000007.1 (2878400 bp)
Overview 1 RT 1: 1212432-1216200 bp 2 RT 2: 1611796-1616974 bp 3 RT 3: 1639057-1642269 bp 4 RT 4: 2059949-2065158 bp 5 RT 5: 2445301-2458220 bp Neighborhood of RT #1 [1212432, 1216301] Phage_XkdX RVT-DGRs Alanine_zipper Neighborhood of RT #2 [1611796, 1617090] Maff2 RVT-GII Intron_maturas2 VirD4 VirD4 DUF3801 Neighborhood of RT #3 [1639057, 1642269] Phage_XkdX RVT-DGRs Neighborhood of RT #4 [2059949, 2065163] PRK07726 RVT-Retrons YjiL truA Neighborhood of RT #5 [2445301, 2458579] YodL LPD16 DUF4316 LPD25 KOG1000 RVT-GII YtxK COG4646 Feature: gene Location: 1212432-1212584 bp Feature: domain Description: Phage_XkdX Location: 1212453-1212564 bp Feature: domain Description: Phage_XkdX Location: 12 12 453-12 12 564 bp Feature: gene Location: 1212586-1212912 bp Feature: gene Location: 1212821-1214206 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1213034-1213778 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 13034-12 13778 bp Feature: gene Location: 1214571-1215866 bp Feature: gene Location: 1215870-1216301 bp Feature: domain Description: Alanine_zipper Location: 1216089-1216200 bp Feature: domain Description: Alanine_zipper Location: 12 16089-12 162 00 bp Feature: gene Location: 1611796-1612011 bp Feature: domain Description: Maff2 Location: 1611799-1612006 bp Feature: domain Description: Maff2 Location: 1611799-1612 006 bp Feature: gene Location: 1612257-1612601 bp Feature: gene Location: 1612769-1614598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1613045-1613879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1613045-1613879 bp Feature: domain Description: Intron_maturas2 Location: 1613963-1614305 bp Feature: domain Description: Intron_maturas2 Location: 1613963-1614305 bp Feature: gene Location: 1615148-1616617 bp Feature: domain Description: VirD4 Location: 1615403-1615715 bp Feature: domain Description: VirD4 Location: 1615403-1615715 bp Feature: domain Description: VirD4 Location: 1615787-1616588 bp Feature: domain Description: VirD4 Location: 1615787-1616588 bp Feature: gene Location: 1616614-1617090 bp Feature: domain Description: DUF3801 Location: 1616689-1616974 bp Feature: domain Description: DUF3801 Location: 1616689-1616974 bp Feature: gene Location: 1639057-1639206 bp Feature: domain Description: Phage_XkdX Location: 1639063-1639198 bp Feature: domain Description: Phage_XkdX Location: 1639063-1639198 bp Feature: gene Location: 1639222-1639419 bp Feature: gene Location: 1639445-1640608 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1639658-1640285 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1639658-16402 85 bp Feature: gene Location: 1640761-1640895 bp Feature: gene Location: 1640992-1642269 bp Feature: gene Location: 2059949-2062129 bp Feature: domain Description: PRK07726 Location: 2059955-2061926 bp Feature: domain Description: PRK0772 6 Location: 2 059955-2 06192 6 bp Feature: gene Location: 2062152-2062409 bp Feature: gene Location: 2062406-2063407 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2062571-2063126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 062 571-2 06312 6 bp Feature: gene Location: 2063642-2064400 bp Feature: domain Description: YjiL Location: 2063648-2064395 bp Feature: domain Description: YjiL Location: 2 063648-2 064395 bp Feature: gene Location: 2064426-2065163 bp Feature: domain Description: truA Location: 2064429-2065158 bp Feature: domain Description: truA Location: 2 06442 9-2 065158 bp Feature: gene Location: 2445301-2448096 bp Feature: domain Description: YodL Location: 2446120-2446414 bp Feature: domain Description: YodL Location: 2 44612 0-2 446414 bp Feature: domain Description: LPD16 Location: 2446444-2446666 bp Feature: domain Description: LPD16 Location: 2 446444-2 446666 bp Feature: domain Description: DUF4316 Location: 2446714-2446798 bp Feature: domain Description: DUF4316 Location: 2 446714-2 446798 bp Feature: domain Description: LPD25 Location: 2447407-2447698 bp Feature: domain Description: LPD2 5 Location: 2 447407-2 447698 bp Feature: gene Location: 2448139-2449182 bp Feature: domain Description: KOG1000 Location: 2448148-2448352 bp Feature: domain Description: KOG1000 Location: 2 448148-2 448352 bp Feature: gene Location: 2449329-2451242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2449647-2450373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 449647-2 450373 bp Feature: gene Location: 2451406-2451552 bp Feature: gene Location: 2451929-2458579 bp Feature: domain Description: YtxK Location: 2454836-2455592 bp Feature: domain Description: YtxK Location: 2 454836-2 455592 bp Feature: domain Description: COG4646 Location: 2455655-2458220 bp Feature: domain Description: COG4646 Location: 2 455655-2 4582 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNWC01000006.1 (546010 bp)
Overview 1 RT 1: 111252-118879 bp Neighborhood of RT #1 [111252, 118962] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 111252-113456 bp Feature: gene Location: 113456-114295 bp Feature: domain Description: AAA_10 Location: 113459-114257 bp Feature: domain Description: AAA_10 Location: 113 459-114257 bp Feature: gene Location: 114513-116339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114813-115512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114813 -115512 bp Feature: gene Location: 117036-118586 bp Feature: domain Description: AAA_10 Location: 118365-118548 bp Feature: domain Description: AAA_10 Location: 1183 65-118548 bp Feature: gene Location: 118564-118962 bp Feature: domain Description: TcpE Location: 118582-118879 bp Feature: domain Description: TcpE Location: 118582-118879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT