myRT

myRT report for GCA_900105365.1_IMG-taxon_2690315650_annotated_assembly

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Seq: FNSX01000001.1 (8782967 bp)
Overview 1 RT 1: 2869104-2874228 bp 2 RT 2: 7129371-7134038 bp 3 RT 3: 7316435-7319390 bp 4 RT 4: 7451285-7456875 bp Neighborhood of RT #1 [2869104, 2874228] PBP1_ABC_uncharacterized_transporter RVT-GII GIIM DUF4145 Neighborhood of RT #2 [7129371, 7134154] Peptidase_S26 DUF2840 RVT-GII GIIM RepA HTH_17 Neighborhood of RT #3 [7316435, 7319390] Lipocalin_5 RVT-GII GIIM Neighborhood of RT #4 [7451285, 7456898] CadC1 RVT-GII EmrA Feature: gene Location: 2869104-2869445 bp Feature: gene Location: 2869801-2870658 bp Feature: domain Description: PBP1_ABC_uncharacterized_transporter Location: 2869813-2870617 bp Feature: domain Description: PBP1 _ABC_uncharacterized_transporter Location: 286981 3-287061 7 bp Feature: gene Location: 2871466-2872755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2871715-2872378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2871 71 5-2872378 bp Feature: domain Description: GIIM Note: maturase Location: 2872447-2872657 bp Feature: domain Description: GIIM Note: maturase Location: 2872447-2872657 bp Feature: gene Location: 2873027-2873692 bp Feature: domain Description: DUF4145 Location: 2873297-2873591 bp Feature: domain Description: DUF41 45 Location: 2873297-2873591 bp Feature: gene Location: 2874097-2874228 bp Feature: gene Location: 7129371-7129883 bp Feature: domain Description: Peptidase_S26 Location: 7129461-7129872 bp Feature: domain Description: Peptidase_S26 Location: 71 29461 -71 29872 bp Feature: gene Location: 7129880-7130344 bp Feature: domain Description: DUF2840 Location: 7129892-7130330 bp Feature: domain Description: DUF2840 Location: 71 29892-71 30330 bp Feature: gene Location: 7131324-7132850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7131627-7132344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 31 627-71 32344 bp Feature: domain Description: GIIM Note: maturase Location: 7132428-7132650 bp Feature: domain Description: GIIM Note: maturase Location: 71 32428-71 32650 bp Feature: gene Location: 7133264-7133845 bp Feature: domain Description: RepA Location: 7133294-7133744 bp Feature: domain Description: RepA Location: 71 33294-71 33744 bp Feature: gene Location: 7133861-7134154 bp Feature: domain Description: HTH_17 Location: 7133897-7134038 bp Feature: domain Description: HTH_1 7 Location: 71 33897-71 34038 bp Feature: gene Location: 7316435-7316896 bp Feature: domain Description: Lipocalin_5 Location: 7316468-7316882 bp Feature: domain Description: Lipocalin_5 Location: 731 6468-731 6882 bp Feature: gene Location: 7317244-7317381 bp Feature: gene Location: 7317491-7318735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7317695-7318352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 7695-731 8352 bp Feature: domain Description: GIIM Note: maturase Location: 7318433-7318658 bp Feature: domain Description: GIIM Note: maturase Location: 731 8433-731 8658 bp Feature: gene Location: 7318965-7319159 bp Feature: gene Location: 7319196-7319390 bp Feature: gene Location: 7451285-7451842 bp Feature: gene Location: 7453012-7453698 bp Feature: domain Description: CadC1 Location: 7453186-7453474 bp Feature: domain Description: CadC1 Location: 74531 86-7453474 bp Feature: gene Location: 7453849-7455096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7453909-7454593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7453909-7454593 bp Feature: gene Location: 7455095-7455292 bp Feature: gene Location: 7455930-7456898 bp Feature: domain Description: EmrA Location: 7456023-7456875 bp Feature: domain Description: EmrA Location: 7456023-7456875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_ABC_uncharacterized_transporter, RVT-GII, GIIM (pfam08388), DUF4145 (pfam13643), Peptidase_S26 (pfam10502), DUF2840 (pfam11000), RepA (COG5534), HTH_17 (pfam12728), Lipocalin_5 (pfam13924), CadC1 (COG3710)
EmrA (COG1566)

Seq: FNSX01000002.1 (736251 bp)
Overview 1 RT 1: 142475-146636 bp 2 RT 2: 436925-439941 bp Neighborhood of RT #1 [142475, 146653] fdhA_non_GSH group_II_RT_mat RVT-GII RVT-GII GIIM HATPase_TmoS-FixL-DctS-like Neighborhood of RT #2 [436925, 439941] RVT-GII Transposase_mut Feature: gene Location: 142475-143677 bp Feature: domain Description: fdhA_non_GSH Location: 142484-143657 bp Feature: domain Description: fdhA_non_GSH Location: 142 484-143657 bp Feature: gene Location: 144316-144543 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 144394-144541 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 144394-144541 bp Feature: gene Location: 144556-145080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144565-145030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144565-145030 bp Feature: gene Location: 145085-145378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145091-145229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145091-1452 2 9 bp Feature: gene Location: 145345-145635 bp Feature: domain Description: GIIM Note: maturase Location: 145375-145492 bp Feature: domain Description: GIIM Note: maturase Location: 145375-145492 bp Feature: gene Location: 146264-146653 bp Feature: domain Description: HATPase_TmoS-FixL-DctS-like Location: 146432-146636 bp Feature: domain Description: HATPase_TmoS-FixL-DctS-like Location: 146432 -146636 bp Feature: gene Location: 436925-437227 bp Feature: gene Location: 437481-437759 bp Feature: gene Location: 437810-438400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437813-438338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437813-438338 bp Feature: gene Location: 438423-439136 bp Feature: domain Description: Transposase_mut Location: 438477-439089 bp Feature: domain Description: Transposase_mut Location: 438477-439089 bp Feature: gene Location: 439642-439941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fdhA_non_GSH (TIGR02819), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), HATPase_TmoS-FixL-DctS-like (cd16920), Transposase_mut (pfam00872)