myRT

myRT report for GCA_900105855.1_IMG-taxon_2634166275_annotated_assembly

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Seq: LT629789.1 (9472622 bp)
Overview 1 RT 1: 1421698-1428594 bp 2 RT 2: 5575960-5581711 bp 3 RT 3: 6089075-6095969 bp 4 RT 4: 6167105-6170220 bp 5 RT 5: 8400526-8405624 bp 6 RT 6: 8409890-8413359 bp 7 RT 7: 8626473-8633231 bp Neighborhood of RT #1 [1421698, 1428594] dnaE2 RVT_N RVT-GII GIIM dnaE2 Neighborhood of RT #2 [5575960, 5581779] TNT Pentapeptide_4 Pentapeptide_4 Pentapeptide RVT-Retrons VOC_like Hemerythrin Neighborhood of RT #3 [6089075, 6095969] Acetyltransf_CG dnaE2 RVT-GII GIIM dnaE2 Neighborhood of RT #4 [6167105, 6170220] QueC RVT-CRISPR-like YfmG Neighborhood of RT #5 [8400526, 8405624] betaine_BetI COG5659 RVT-GII GIIM RVT-GII Neighborhood of RT #6 [8409890, 8413385] IS285 RVT-GII MlaE Neighborhood of RT #7 [8626473, 8633365] dnaE2 RVT_N RVT-GII GIIM dnaE2 Acetyltransf_CG Feature: gene Location: 1421698-1421889 bp Feature: gene Location: 1422263-1423978 bp Feature: domain Description: dnaE2 Location: 1422317-1423907 bp Feature: domain Description: dnaE2 Location: 1 42231 7-1 423907 bp Feature: gene Location: 1424578-1426356 bp Feature: domain Description: RVT_N Location: 1424623-1424857 bp Feature: domain Description: RVT_N Location: 1 424623-1 424857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1424920-1425577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 424920-1 425577 bp Feature: domain Description: GIIM Note: maturase Location: 1425631-1425865 bp Feature: domain Description: GIIM Note: maturase Location: 1 425631 -1 425865 bp Feature: gene Location: 1426451-1427980 bp Feature: domain Description: dnaE2 Location: 1426454-1427978 bp Feature: domain Description: dnaE2 Location: 1 426454-1 427978 bp Feature: gene Location: 1428172-1428594 bp Feature: gene Location: 5575960-5578827 bp Feature: domain Description: TNT Location: 5578543-5578795 bp Feature: domain Description: TNT Location: 5578543-5578795 bp Feature: gene Location: 5578904-5579662 bp Feature: domain Description: Pentapeptide_4 Location: 5579141-5579240 bp Feature: domain Description: Pentapeptide_4 Location: 55791 41 -5579240 bp Feature: domain Description: Pentapeptide_4 Location: 5579261-5579486 bp Feature: domain Description: Pentapeptide_4 Location: 5579261 -5579486 bp Feature: domain Description: Pentapeptide Location: 5579498-5579603 bp Feature: domain Description: Pentapeptide Location: 5579498-5579603 bp Feature: gene Location: 5579514-5580581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5579715-5580351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 557971 5-5580351 bp Feature: gene Location: 5580721-5581203 bp Feature: domain Description: VOC_like Location: 5580754-5581096 bp Feature: domain Description: VOC_like Location: 5580754-5581 096 bp Feature: gene Location: 5581270-5581779 bp Feature: domain Description: Hemerythrin Location: 5581324-5581711 bp Feature: domain Description: Hemerythrin Location: 5581 324-5581 71 1 bp Feature: gene Location: 6089075-6089692 bp Feature: domain Description: Acetyltransf_CG Location: 6089444-6089558 bp Feature: domain Description: Acetyltransf_CG Location: 6089444-6089558 bp Feature: gene Location: 6089689-6091218 bp Feature: domain Description: dnaE2 Location: 6089692-6091216 bp Feature: domain Description: dnaE2 Location: 6089692-6091 21 6 bp Feature: gene Location: 6091313-6092374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6091319-6091595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6091 31 9-6091 595 bp Feature: domain Description: GIIM Note: maturase Location: 6091649-6091883 bp Feature: domain Description: GIIM Note: maturase Location: 6091 649-6091 883 bp Feature: gene Location: 6093691-6096108 bp Feature: domain Description: dnaE2 Location: 6094447-6096037 bp Feature: domain Description: dnaE2 Location: 6094447-6096037 bp Feature: gene Location: 6095778-6095969 bp Feature: gene Location: 6167105-6167587 bp Feature: gene Location: 6167572-6168294 bp Feature: domain Description: QueC Location: 6167626-6168283 bp Feature: domain Description: QueC Location: 61 67626-61 68283 bp Feature: gene Location: 6168509-6169288 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6168713-6169250 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 61 6871 3-61 69250 bp Feature: gene Location: 6169292-6169849 bp Feature: domain Description: YfmG Location: 6169436-6169844 bp Feature: domain Description: YfmG Location: 61 69436-61 69844 bp Feature: gene Location: 6169912-6170220 bp Feature: gene Location: 8400526-8401146 bp Feature: domain Description: betaine_BetI Location: 8400577-8401066 bp Feature: domain Description: betaine_BetI Location: 8400577-8401 066 bp Feature: gene Location: 8402373-8402927 bp Feature: domain Description: COG5659 Location: 8402670-8402880 bp Feature: domain Description: COG5659 Location: 8402670-8402880 bp Feature: gene Location: 8403192-8404064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8403408-8404014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8403408-840401 4 bp Feature: gene Location: 8403886-8404467 bp Feature: domain Description: GIIM Note: maturase Location: 8404153-8404369 bp Feature: domain Description: GIIM Note: maturase Location: 84041 53-8404369 bp Feature: gene Location: 8404531-8404716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8404537-8404675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8404537-8404675 bp Feature: gene Location: 8405120-8405407 bp Feature: gene Location: 8405496-8405624 bp Feature: gene Location: 8409890-8410423 bp Feature: domain Description: IS285 Location: 8409980-8410403 bp Feature: domain Description: IS285 Location: 8409980-841 0403 bp Feature: gene Location: 8410202-8410501 bp Feature: gene Location: 8410839-8411024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8410845-8410983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 841 0845-841 0983 bp Feature: gene Location: 8411975-8412400 bp Feature: gene Location: 8412528-8413385 bp Feature: domain Description: MlaE Location: 8412594-8413359 bp Feature: domain Description: MlaE Location: 841 2594-841 3359 bp Feature: gene Location: 8626473-8626667 bp Feature: gene Location: 8627034-8628749 bp Feature: domain Description: dnaE2 Location: 8627088-8628678 bp Feature: domain Description: dnaE2 Location: 8627088-8628678 bp Feature: gene Location: 8629349-8631127 bp Feature: domain Description: RVT_N Location: 8629394-8629628 bp Feature: domain Description: RVT_N Location: 8629394-8629628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8629691-8630348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8629691 -8630348 bp Feature: domain Description: GIIM Note: maturase Location: 8630402-8630636 bp Feature: domain Description: GIIM Note: maturase Location: 8630402-8630636 bp Feature: gene Location: 8631222-8632751 bp Feature: domain Description: dnaE2 Location: 8631225-8632749 bp Feature: domain Description: dnaE2 Location: 8631 225-8632749 bp Feature: gene Location: 8632943-8633365 bp Feature: domain Description: Acetyltransf_CG Location: 8633075-8633231 bp Feature: domain Description: Acetyltransf_CG Location: 8633075-8633231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE2 (PRK05672), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TNT (pfam14021), Pentapeptide_4 (pfam13599), Pentapeptide (pfam00805), RVT-Retrons, VOC_like (cd16355), Hemerythrin (TIGR00058)
Acetyltransf_CG (pfam14542), QueC (pfam06508), RVT-CRISPR, YfmG (COG1262), betaine_BetI (TIGR03384), COG5659 (SRSO17 transposase ), IS285 (COG3328), MlaE (pfam02405)