myRT

myRT report for GCA_900106605.1_IMG-taxon_2693429855_annotated_assembly

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Seq: FNOD01000020.1 (63604 bp)
Overview 1 RT 1: 16577-21681 bp Neighborhood of RT #1 [16577, 21681] Toprim_2 RVT-GII Intron_maturas2 Feature: gene Location: 16577-17980 bp Feature: gene Location: 18191-19120 bp Feature: domain Description: Toprim_2 Location: 18743-19031 bp Feature: domain Description: Toprim_2 Location: 1 8743-1 9031 bp Feature: gene Location: 19092-20900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19356-20178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9356-201 78 bp Feature: domain Description: Intron_maturas2 Location: 20247-20556 bp Feature: domain Description: Intron_maturas2 Location: 20247-20556 bp Feature: gene Location: 21189-21332 bp Feature: gene Location: 21448-21681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNOD01000003.1 (257988 bp)
Overview 1 RT 1: 243596-247545 bp Neighborhood of RT #1 [243596, 247545] RVT-DGRs Feature: gene Location: 243596-243886 bp Feature: gene Location: 243896-245257 bp Feature: gene Location: 245590-246777 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 245923-246550 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4592 3-2 46550 bp Feature: gene Location: 246740-247168 bp Feature: gene Location: 247369-247545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNOD01000025.1 (45812 bp)
Overview 1 RT 1: 7187-10567 bp Neighborhood of RT #1 [7187, 10659] COG3943 RVT-Retrons HTH_17 Feature: gene Location: 7187-7552 bp Feature: domain Description: COG3943 Location: 7226-7484 bp Feature: domain Description: COG3 943 Location: 7226-7484 bp Feature: gene Location: 7818-8699 bp Feature: gene Location: 8730-9587 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8892-9417 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8892-9417 bp Feature: gene Location: 9613-9828 bp Feature: gene Location: 10294-10659 bp Feature: domain Description: HTH_17 Location: 10429-10567 bp Feature: domain Description: HTH_17 Location: 10429-10567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNOD01000004.1 (240955 bp)
Overview 1 RT 1: 57143-62011 bp Neighborhood of RT #1 [57143, 62011] Bac_Flav_CT_G Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 57143-57766 bp Feature: domain Description: Bac_Flav_CT_G Location: 57146-57764 bp Feature: domain Description: Bac_Flav_CT_G Location: 5714 6-57764 bp Feature: gene Location: 57824-59038 bp Feature: domain Description: Bac_Flav_CT_G Location: 57827-58982 bp Feature: domain Description: Bac_Flav_CT_G Location: 57827-58982 bp Feature: gene Location: 59609-61255 bp Feature: domain Description: RVT_N Location: 59663-59906 bp Feature: domain Description: RVT_N Location: 59663-59906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59951-60596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59951-60596 bp Feature: domain Description: GIIM Note: maturase Location: 60650-60881 bp Feature: domain Description: GIIM Note: maturase Location: 60650-60881 bp Feature: gene Location: 61264-61857 bp Feature: domain Description: Bac_Flav_CT_G Location: 61381-61840 bp Feature: domain Description: Bac_Flav_CT_G Location: 61381-6184 0 bp Feature: gene Location: 61880-62011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNOD01000009.1 (125300 bp)
Overview 1 RT 1: 48614-52688 bp 2 RT 2: 84367-89295 bp Neighborhood of RT #1 [48614, 52688] RibD_C TraG-D_C RVT_N RVT-GII GIIM Neighborhood of RT #2 [84367, 89295] INTN1_C_like RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 48614-49108 bp Feature: domain Description: RibD_C Location: 48920-49082 bp Feature: domain Description: RibD_C Location: 48920-49082 bp Feature: gene Location: 49330-50565 bp Feature: domain Description: TraG-D_C Location: 49909-50245 bp Feature: domain Description: TraG-D_C Location: 49909-5 0245 bp Feature: gene Location: 50570-52222 bp Feature: domain Description: RVT_N Location: 50624-50867 bp Feature: domain Description: RVT_N Location: 5 0624-5 0867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50912-51560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 0912-5 15 60 bp Feature: domain Description: GIIM Note: maturase Location: 51614-51845 bp Feature: domain Description: GIIM Note: maturase Location: 5 1614-5 1845 bp Feature: gene Location: 52304-52477 bp Feature: gene Location: 52539-52688 bp Feature: gene Location: 84367-84771 bp Feature: gene Location: 84966-85298 bp Feature: domain Description: INTN1_C_like Location: 85074-85251 bp Feature: domain Description: INTN1_C_like Location: 85 074-85 25 1 bp Feature: gene Location: 85306-87123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85570-86392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 5 70-86392 bp Feature: domain Description: Intron_maturas2 Location: 86467-86773 bp Feature: domain Description: Intron_maturas2 Location: 86467-86773 bp Feature: gene Location: 87665-88825 bp Feature: domain Description: Arm-DNA-bind_5 Location: 87830-88058 bp Feature: domain Description: Arm-DNA-bind_5 Location: 87830-8805 8 bp Feature: domain Description: Phage_int_SAM_5 Location: 88181-88427 bp Feature: domain Description: Phage_int_SAM_5 Location: 88181-88427 bp Feature: domain Description: INTN1_C_like Location: 88475-88802 bp Feature: domain Description: INTN1_C_like Location: 88475 -88802 bp Feature: gene Location: 89086-89295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT