myRT

myRT report for GCA_900106645.1_IMG-taxon_2693429883_annotated_assembly

Download annotations/find similar RTs

Seq: FNMV01000003.1 (296237 bp)
Overview 1 RT 1: 196098-203520 bp Neighborhood of RT #1 [196098, 203594] RVT-GII GIIM YbjD UvrD UvrD Feature: gene Location: 196098-196610 bp Feature: gene Location: 196814-197785 bp Feature: gene Location: 197831-199147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198026-198641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 98026-1 98641 bp Feature: domain Description: GIIM Note: maturase Location: 198713-198941 bp Feature: domain Description: GIIM Note: maturase Location: 1 9871 3-1 98941 bp Feature: gene Location: 199837-201768 bp Feature: domain Description: YbjD Location: 199840-201736 bp Feature: domain Description: YbjD Location: 1 99840-201 736 bp Feature: gene Location: 201765-203594 bp Feature: domain Description: UvrD Location: 201786-202872 bp Feature: domain Description: UvrD Location: 201 786-202872 bp Feature: domain Description: UvrD Location: 203313-203520 bp Feature: domain Description: UvrD Location: 20331 3-203520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YbjD (COG3593), UvrD (COG0210)

Seq: FNMV01000009.1 (191676 bp)
Overview 1 RT 1: 141831-148224 bp Neighborhood of RT #1 [141831, 149336] RVT-UG14 DUF553 DUF553 Feature: gene Location: 141831-142370 bp Feature: gene Location: 142528-144966 bp Feature: gene Location: 145147-146691 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 145573-146062 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 145573-146062 bp Feature: gene Location: 147194-147406 bp Feature: gene Location: 147729-149336 bp Feature: domain Description: DUF553 Location: 147903-148002 bp Feature: domain Description: DUF553 Location: 147903-148002 bp Feature: domain Description: DUF553 Location: 148068-148224 bp Feature: domain Description: DUF553 Location: 148068-1482 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, DUF553 (pfam04473)

Seq: FNMV01000002.1 (363689 bp)
Overview 1 RT 1: 182372-190195 bp Neighborhood of RT #1 [182372, 190224] Endonuclease_1 FN3 LTD FN3 LTD LTD MnuA_DNase1-like SprB SprB Por_Secre_tail RVT-Retrons DinB_2 Feature: gene Location: 182372-187609 bp Feature: domain Description: Endonuclease_1 Location: 182489-183119 bp Feature: domain Description: Endonuclease_1 Location: 182489-183 119 bp Feature: domain Description: FN3 Location: 183200-183413 bp Feature: domain Description: FN3 Location: 183 200-183 413 bp Feature: domain Description: LTD Location: 183467-183770 bp Feature: domain Description: LTD Location: 183 467-183 770 bp Feature: domain Description: FN3 Location: 183983-184175 bp Feature: domain Description: FN3 Location: 183 983 -184175 bp Feature: domain Description: LTD Location: 184241-184544 bp Feature: domain Description: LTD Location: 184241-184544 bp Feature: domain Description: LTD Location: 184742-185027 bp Feature: domain Description: LTD Location: 184742-185027 bp Feature: domain Description: MnuA_DNase1-like Location: 185846-186728 bp Feature: domain Description: MnuA_DNase1-like Location: 185846-186728 bp Feature: domain Description: SprB Location: 186761-186863 bp Feature: domain Description: SprB Location: 186761-186863 bp Feature: domain Description: SprB Location: 187055-187100 bp Feature: domain Description: SprB Location: 187055-187100 bp Feature: domain Description: Por_Secre_tail Location: 187373-187604 bp Feature: domain Description: Por_Secre_tail Location: 1873 73 -187604 bp Feature: gene Location: 187796-188005 bp Feature: gene Location: 188155-189216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 188380-188932 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1883 80-18893 2 bp Feature: gene Location: 189410-189667 bp Feature: gene Location: 189766-190224 bp Feature: domain Description: DinB_2 Location: 189805-190195 bp Feature: domain Description: DinB_2 Location: 189805-190195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endonuclease_1 (pfam04231), FN3 (smart00060), LTD (pfam00932), MnuA_DNase1-like (cd10283), SprB (pfam13573), Por_Secre_tail (TIGR04183), RVT-Retrons, DinB_2 (pfam12867)