myRT

myRT report for GCA_900106755.1_IMG-taxon_2693429916_annotated_assembly

Download annotations/find similar RTs

Seq: FNNN01000014.1 (156561 bp)
Overview 1 RT 1: 74070-86772 bp Neighborhood of RT #1 [74070, 86888] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 KOG1803 MTES_1575 DUF3320 rpsA Feature: gene Location: 74070-74579 bp Feature: gene Location: 75484-77670 bp Feature: gene Location: 77875-79008 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 78199-78745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 781 99-78745 bp Feature: gene Location: 79050-84923 bp Feature: domain Description: DUF4011 Location: 80214-80724 bp Feature: domain Description: DUF401 1 Location: 8021 4-80724 bp Feature: domain Description: DEXXQc_SF1 Location: 81063-81672 bp Feature: domain Description: DEXXQc_SF1 Location: 81 063-81 672 bp Feature: domain Description: DEXXQc_SF1 Location: 82335-83250 bp Feature: domain Description: DEXXQc_SF1 Location: 82335-83250 bp Feature: domain Description: KOG1803 Location: 83385-83763 bp Feature: domain Description: KOG1 803 Location: 83385-83763 bp Feature: domain Description: MTES_1575 Location: 83922-84210 bp Feature: domain Description: MTES_1 575 Location: 83922-8421 0 bp Feature: domain Description: DUF3320 Location: 84441-84561 bp Feature: domain Description: DUF3320 Location: 84441 -84561 bp Feature: gene Location: 85092-86888 bp Feature: domain Description: rpsA Location: 85161-86772 bp Feature: domain Description: rpsA Location: 851 61 -86772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNNN01000065.1 (2494 bp)
Overview 1 RT 1: 64-2354 bp Neighborhood of RT #1 [64, 2380] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 64-225 bp Feature: gene Location: 545-2380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1661 bp Feature: domain Description: Intron_maturas2 Location: 1820-2189 bp Feature: domain Description: Intron_maturas2 Location: 182 0-2 189 bp Feature: domain Description: HNHc Note: nucleases Location: 2213-2354 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 13-2 354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNNN01000002.1 (376612 bp)
Overview 1 RT 1: 45445-48673 bp Neighborhood of RT #1 [45445, 48765] Virulence_RhuM RVT-Retrons HTH_17 Feature: gene Location: 45445-45660 bp Feature: domain Description: Virulence_RhuM Location: 45487-45592 bp Feature: domain Description: Virulence_RhuM Location: 45487-45592 bp Feature: gene Location: 45925-46806 bp Feature: gene Location: 46837-47694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46999-47524 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46999-47524 bp Feature: gene Location: 47719-47934 bp Feature: gene Location: 48400-48765 bp Feature: domain Description: HTH_17 Location: 48535-48673 bp Feature: domain Description: HTH_17 Location: 4853 5-48673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNNN01000012.1 (176906 bp)
Overview 1 RT 1: 145531-154671 bp Neighborhood of RT #1 [145531, 154671] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII GIIM Spc7 Feature: gene Location: 145531-146130 bp Feature: domain Description: DUF1896 Location: 145708-146128 bp Feature: domain Description: DUF1896 Location: 14 5708-14 6128 bp Feature: gene Location: 146120-150832 bp Feature: domain Description: N6_Mtase Location: 146681-147038 bp Feature: domain Description: N6_Mtase Location: 14 6681-14 7038 bp Feature: domain Description: COG4646 Location: 148442-150449 bp Feature: domain Description: COG4 64 6 Location: 14 84 4 2-1504 4 9 bp Feature: gene Location: 151489-153156 bp Feature: domain Description: RVT_N Location: 151543-151786 bp Feature: domain Description: RVT_N Location: 15154 3-151786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151831-152479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151831-1524 79 bp Feature: domain Description: GIIM Note: maturase Location: 152533-152764 bp Feature: domain Description: GIIM Note: maturase Location: 152533-152764 bp Feature: gene Location: 153110-154423 bp Feature: domain Description: Spc7 Location: 154034-154301 bp Feature: domain Description: Spc7 Location: 154 034 -154 301 bp Feature: gene Location: 154510-154671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNNN01000007.1 (246227 bp)
Overview 1 RT 1: 62230-63773 bp 2 RT 2: 132061-136770 bp Neighborhood of RT #1 [62230, 63773] RVT-GII HTH_28 Neighborhood of RT #2 [132061, 136784] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G Feature: gene Location: 62230-62592 bp Feature: gene Location: 62596-62805 bp Feature: gene Location: 62835-63032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62838-63030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62838-63030 bp Feature: gene Location: 63153-63443 bp Feature: domain Description: HTH_28 Location: 63177-63321 bp Feature: domain Description: HTH_28 Location: 63177-63321 bp Feature: gene Location: 63621-63773 bp Feature: gene Location: 132061-133890 bp Feature: domain Description: Bac_Flav_CT_G Location: 132064-133876 bp Feature: domain Description: Bac_Flav_CT_G Location: 132064-133876 bp Feature: gene Location: 133918-134091 bp Feature: gene Location: 134437-136248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134701-135523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134701-135 5 23 bp Feature: domain Description: Intron_maturas2 Location: 135598-135913 bp Feature: domain Description: Intron_maturas2 Location: 135 5 98-135 913 bp Feature: domain Description: HNHc Note: nucleases Location: 136069-136219 bp Feature: domain Description: HNHc Note: nucleases Location: 136069-136219 bp Feature: gene Location: 136326-136604 bp Feature: domain Description: Bac_Flav_CT_G Location: 136344-136602 bp Feature: domain Description: Bac_Flav_CT_G Location: 136344-136602 bp Feature: gene Location: 136611-136784 bp Feature: domain Description: Bac_Flav_CT_G Location: 136614-136770 bp Feature: domain Description: Bac_Flav_CT_G Location: 136614-136770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT