myRT

myRT report for GCA_900107165.1_IMG-taxon_2675903041_annotated_assembly

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Seq: FNOY01000118.1 (3709 bp)
Overview 1 RT 1: 61-3451 bp Neighborhood of RT #1 [61, 3451] TnpB_IS66 RVT-UG11 Feature: gene Location: 61-429 bp Feature: domain Description: TnpB_IS66 Location: 91-379 bp Feature: domain Description: TnpB_IS66 Location: 91 -379 bp Feature: gene Location: 417-713 bp Feature: gene Location: 1306-2079 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1438-1888 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 438-1 888 bp Feature: gene Location: 2404-2565 bp Feature: gene Location: 3017-3451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-UG11

Seq: FNOY01000099.1 (7216 bp)
Overview 1 RT 1: 503-3349 bp Neighborhood of RT #1 [503, 3349] ParD_like RVT-GII group_II_RT_mat Feature: gene Location: 503-724 bp Feature: domain Description: ParD_like Location: 515-692 bp Feature: domain Description: ParD_like Location: 515-692 bp Feature: gene Location: 1355-1576 bp Feature: gene Location: 1653-2852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965-2514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965-2 514 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2520-2739 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 52 0-2 739 bp Feature: gene Location: 2900-3034 bp Feature: gene Location: 3047-3349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParD_like (pfam11903), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: FNOY01000013.1 (62987 bp)
Overview 1 RT 1: 3-1409 bp Neighborhood of RT #1 [3, 1409] RVT-GII Feature: gene Location: 3-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177-837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177-83 7 bp Feature: gene Location: 1000-1179 bp Feature: gene Location: 1233-1409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FNOY01000142.1 (1450 bp)
Overview 1 RT 1: 67-1348 bp Neighborhood of RT #1 [67, 1449] RVT-GII GIIM Feature: gene Location: 67-1449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-1063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 03-1063 bp Feature: domain Description: GIIM Note: maturase Location: 1132-1348 bp Feature: domain Description: GIIM Note: maturase Location: 1132-134 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FNOY01000048.1 (21497 bp)
Overview 1 RT 1: 2534-9967 bp Neighborhood of RT #1 [2534, 9972] GxxExxY YhcG YhcG_C RVT-UG5 TIGR02687 PDDEXK_3 Feature: gene Location: 2534-2956 bp Feature: domain Description: GxxExxY Location: 2606-2951 bp Feature: domain Description: GxxExxY Location: 2606-295 1 bp Feature: gene Location: 3009-4115 bp Feature: domain Description: YhcG Location: 3369-3519 bp Feature: domain Description: YhcG Location: 3369-35 19 bp Feature: domain Description: YhcG_C Location: 3597-4059 bp Feature: domain Description: YhcG_C Location: 35 97-405 9 bp Feature: gene Location: 4112-7147 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4595-5072 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 45 95 -5 072 bp Feature: gene Location: 7144-9747 bp Feature: domain Description: TIGR02687 Location: 7222-9700 bp Feature: domain Description: TIGR02687 Location: 7222-9700 bp Feature: gene Location: 9838-9972 bp Feature: domain Description: PDDEXK_3 Location: 9841-9967 bp Feature: domain Description: PDDEXK_3 Location: 9841-9967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GxxExxY (TIGR04256), YhcG (COG4804), YhcG_C, RVT-UG5, TIGR02687 (TIGR02687 family protein), PDDEXK_3 (pfam13366)