myRT

myRT report for GCA_900107545.1_IMG-taxon_2593339240_annotated_assembly

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Seq: FNQZ01000002.1 (440583 bp)
Overview 1 RT 1: 86703-96472 bp Neighborhood of RT #1 [86703, 96472] DUF772 DDE_Tnp_1_6 RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII NolL Feature: gene Location: 86703-87722 bp Feature: domain Description: DUF772 Location: 86877-87075 bp Feature: domain Description: DUF772 Location: 86877-87075 bp Feature: gene Location: 87744-88175 bp Feature: domain Description: DDE_Tnp_1_6 Location: 87840-88050 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 87840-88050 bp Feature: gene Location: 89380-90048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89383-89590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89383-89590 bp Feature: domain Description: GIIM Note: maturase Location: 89650-89878 bp Feature: domain Description: GIIM Note: maturase Location: 89650-89878 bp Feature: gene Location: 90209-91534 bp Feature: domain Description: Phage_int_SAM_1 Location: 90674-90875 bp Feature: domain Description: Phage_int_SAM_1 Location: 90674-90875 bp Feature: domain Description: INT_RitA_C_like Location: 90965-91508 bp Feature: domain Description: INT_RitA_C_like Location: 90965-91 508 bp Feature: gene Location: 91527-92510 bp Feature: domain Description: INT_RitB_C_like Location: 91863-92433 bp Feature: domain Description: INT_RitB_C_like Location: 91 863-92433 bp Feature: gene Location: 92491-93501 bp Feature: domain Description: Phage_int_SAM_1 Location: 92542-92782 bp Feature: domain Description: Phage_int_SAM_1 Location: 92542-92782 bp Feature: domain Description: INT_RitC_C_like Location: 92872-93418 bp Feature: domain Description: INT_RitC_C_like Location: 92872-9341 8 bp Feature: gene Location: 93561-94205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93771-94155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93771 -941 55 bp Feature: gene Location: 94913-95923 bp Feature: domain Description: NolL Location: 94916-95855 bp Feature: domain Description: NolL Location: 9491 6-95855 bp Feature: gene Location: 96293-96472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), NolL (COG3594)