myRT

myRT report for GCA_900108175.1_IMG-taxon_2634166348_annotated_assembly

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Seq: FNVO01000041.1 (34114 bp)
Overview 1 RT 1: 5492-8672 bp Neighborhood of RT #1 [5492, 8672] PTPS NrdG RVT-CRISPR-like YfmG Feature: gene Location: 5492-6007 bp Feature: domain Description: PTPS Location: 5624-5981 bp Feature: domain Description: PTPS Location: 5624-5981 bp Feature: gene Location: 6187-6699 bp Feature: domain Description: NrdG Location: 6190-6682 bp Feature: domain Description: NrdG Location: 61 90-6682 bp Feature: gene Location: 6857-7636 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7061-7595 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7061 -7595 bp Feature: gene Location: 7663-8211 bp Feature: domain Description: YfmG Location: 7777-8206 bp Feature: domain Description: YfmG Location: 7777-8206 bp Feature: gene Location: 8208-8672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTPS (pfam01242), NrdG (TIGR02491), RVT-CRISPR, YfmG (COG1262)

Seq: FNVO01000044.1 (21600 bp)
Overview 1 RT 1: 11862-16339 bp Neighborhood of RT #1 [11862, 16374] xerC RVT-GII GIIM hi_GC_hi_GC_hi_GC_TIGR00026 3beta-17beta-HSD_like_SDR_c Feature: gene Location: 11862-11993 bp Feature: gene Location: 12031-12978 bp Feature: domain Description: xerC Location: 12112-12961 bp Feature: domain Description: xerC Location: 12 112 -12 961 bp Feature: gene Location: 13604-14866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13820-14480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1382 0-14480 bp Feature: domain Description: GIIM Note: maturase Location: 14561-14780 bp Feature: domain Description: GIIM Note: maturase Location: 14561-14780 bp Feature: gene Location: 15149-15571 bp Feature: domain Description: hi_GC_hi_GC_hi_GC_TIGR00026 Location: 15206-15461 bp Feature: domain Description: hi_GC_hi_GC_hi_GC_TIGR0002 6 Location: 152 06-15461 bp Feature: gene Location: 15595-16374 bp Feature: domain Description: 3beta-17beta-HSD_like_SDR_c Location: 15604-16339 bp Feature: domain Description: 3beta-17beta-HSD_like_SDR_c Location: 15604-16339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-GII, GIIM (pfam08388), hi_GC_hi_GC_hi_GC_TIGR00026, 3beta-17beta-HSD_like_SDR_c (cd05341)

Seq: FNVO01000042.1 (31630 bp)
Overview 1 RT 1: 24509-31481 bp Neighborhood of RT #1 [24509, 31627] MalT CsgD RicinB_lectin_2 RicinB_lectin_2 RVT-GII GIIM Transposase_mut Transposase_20 Feature: gene Location: 24509-27121 bp Feature: domain Description: MalT Location: 24536-25409 bp Feature: domain Description: MalT Location: 2453 6-25409 bp Feature: domain Description: CsgD Location: 26921-27077 bp Feature: domain Description: CsgD Location: 26921-27077 bp Feature: gene Location: 27488-28057 bp Feature: domain Description: RicinB_lectin_2 Location: 27644-27860 bp Feature: domain Description: RicinB_lectin_2 Location: 27644-27860 bp Feature: domain Description: RicinB_lectin_2 Location: 27893-28043 bp Feature: domain Description: RicinB_lectin_2 Location: 27893 -28043 bp Feature: gene Location: 28965-30437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29304-30000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293 04-3 0000 bp Feature: domain Description: GIIM Note: maturase Location: 30069-30288 bp Feature: domain Description: GIIM Note: maturase Location: 3 0069-3 0288 bp Feature: gene Location: 30498-31118 bp Feature: domain Description: Transposase_mut Location: 30666-31110 bp Feature: domain Description: Transposase_mut Location: 3 0666-3 1110 bp Feature: gene Location: 31298-31627 bp Feature: domain Description: Transposase_20 Location: 31301-31481 bp Feature: domain Description: Transposase_20 Location: 3 13 01-3 1481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MalT (COG2909), CsgD (COG2771), RicinB_lectin_2 (pfam14200), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), Transposase_20 (pfam02371)