myRT

myRT report for GCA_900108285.1_IMG-taxon_2615840539_annotated_assembly

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Seq: FNUW01000049.1 (21431 bp)
Overview 1 RT 1: 13045-19601 bp Neighborhood of RT #1 [13045, 19609] group_II_RT_mat HNHc HNHc RVT-GII RVT-GII InsE Feature: gene Location: 13045-14094 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 13138-13531 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 31 38-1 3531 bp Feature: domain Description: HNHc Note: nucleases Location: 13843-13981 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3843-1 3981 bp Feature: gene Location: 14171-14665 bp Feature: domain Description: HNHc Note: nucleases Location: 14393-14537 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4393-1 4537 bp Feature: gene Location: 14690-16183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15008-15740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5008-1 5740 bp Feature: gene Location: 16923-17756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17175-17745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 75-1 7745 bp Feature: gene Location: 19036-19269 bp Feature: gene Location: 19340-19609 bp Feature: domain Description: InsE Location: 19349-19601 bp Feature: domain Description: InsE Location: 1 9349-1 9601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNUW01000073.1 (4723 bp)
Overview 1 RT 1: 393-4226 bp Neighborhood of RT #1 [393, 4240] DEDD_Tnp_IS110 COG3547 GIIM RVT-GII DDE_Tnp_1 DDE_Tnp_1 Feature: gene Location: 393-1361 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 414-876 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 414-876 bp Feature: domain Description: COG3547 Location: 972-1353 bp Feature: domain Description: COG3547 Location: 972 -1353 bp Feature: gene Location: 1920-2297 bp Feature: domain Description: GIIM Note: maturase Location: 1950-2172 bp Feature: domain Description: GIIM Note: maturase Location: 1950-2 172 bp Feature: gene Location: 2334-3266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2619-3258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 619-32 58 bp Feature: gene Location: 3337-3639 bp Feature: domain Description: DDE_Tnp_1 Location: 3439-3625 bp Feature: domain Description: DDE_Tnp_1 Location: 3439-362 5 bp Feature: gene Location: 3692-4240 bp Feature: domain Description: DDE_Tnp_1 Location: 3896-4226 bp Feature: domain Description: DDE_Tnp_1 Location: 3896-42 2 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNUW01000048.1 (25291 bp)
Overview 1 RT 1: 1788-5397 bp Neighborhood of RT #1 [1788, 5456] PolY_Pol_V_umuC RVT-GII KOG4768 PRK03103 Feature: gene Location: 1788-2003 bp Feature: gene Location: 2365-2685 bp Feature: domain Description: PolY_Pol_V_umuC Location: 2371-2680 bp Feature: domain Description: PolY_Pol_V_umuC Location: 23 71-2680 bp Feature: gene Location: 2940-4085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3204-4035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 204-403 5 bp Feature: gene Location: 4100-4750 bp Feature: domain Description: KOG4768 Location: 4121-4748 bp Feature: domain Description: KOG4768 Location: 4121-4748 bp Feature: gene Location: 4938-5456 bp Feature: domain Description: PRK03103 Location: 4944-5397 bp Feature: domain Description: PRK03 103 Location: 4944-53 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNUW01000020.1 (106976 bp)
Overview 1 RT 1: 29071-34538 bp 2 RT 2: 77204-87724 bp Neighborhood of RT #1 [29071, 34555] CwlT_like NlpD Spr RVT-GII HNHc CwlT_like Neighborhood of RT #2 [77204, 87903] RVT-GII HNHc RVT-GII Intron_maturas2 RVT-GII RVT-GII rpsA Feature: gene Location: 29071-29646 bp Feature: gene Location: 29663-30763 bp Feature: domain Description: CwlT_like Location: 29690-29876 bp Feature: domain Description: CwlT_like Location: 29690-29876 bp Feature: domain Description: NlpD Location: 29903-30335 bp Feature: domain Description: NlpD Location: 29903-30335 bp Feature: domain Description: Spr Location: 30368-30704 bp Feature: domain Description: Spr Location: 30368-30704 bp Feature: gene Location: 30832-32628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31090-31795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31090-31795 bp Feature: domain Description: HNHc Note: nucleases Location: 32356-32491 bp Feature: domain Description: HNHc Note: nucleases Location: 32356-324 91 bp Feature: gene Location: 32940-33158 bp Feature: gene Location: 33401-34555 bp Feature: domain Description: CwlT_like Location: 34253-34538 bp Feature: domain Description: CwlT_like Location: 34 253-34 538 bp Feature: gene Location: 77204-77671 bp Feature: gene Location: 77689-78993 bp Feature: gene Location: 79675-81465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79972-80668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79972-80668 bp Feature: domain Description: HNHc Note: nucleases Location: 81208-81340 bp Feature: domain Description: HNHc Note: nucleases Location: 81208-8134 0 bp Feature: gene Location: 81531-81803 bp Feature: gene Location: 82388-84058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82643-83468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8264 3-834 68 bp Feature: domain Description: Intron_maturas2 Location: 83549-83840 bp Feature: domain Description: Intron_maturas2 Location: 8354 9-8384 0 bp Feature: gene Location: 84814-85257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85135-85255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85135-85255 bp Feature: gene Location: 85312-85995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85321-85870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85321-85870 bp Feature: gene Location: 86047-86835 bp Feature: gene Location: 86890-87903 bp Feature: domain Description: rpsA Location: 87187-87724 bp Feature: domain Description: rpsA Location: 87187-87724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT