myRT

myRT report for GCA_900108355.1_IMG-taxon_2654588150_annotated_assembly

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Seq: FNXA01000019.1 (173441 bp)
Overview 1 RT 1: 11819-18124 bp 2 RT 2: 98619-105558 bp Neighborhood of RT #1 [11819, 18159] ubiB TPMT RVT_N RVT-GII GIIM HNH COG2331 COG2928 Neighborhood of RT #2 [98619, 105563] R_switched_YjbE PilA RVT_N RVT-GII GIIM HNHc PglL_A Wzy_C Wzy_C_2 moaC Feature: gene Location: 11819-13402 bp Feature: domain Description: ubiB Location: 11822-13382 bp Feature: domain Description: ubiB Location: 1 1 822-1 3382 bp Feature: gene Location: 13425-14072 bp Feature: domain Description: TPMT Location: 13494-14040 bp Feature: domain Description: TPMT Location: 1 3494-1 4040 bp Feature: gene Location: 15341-16942 bp Feature: domain Description: RVT_N Location: 15344-15542 bp Feature: domain Description: RVT_N Location: 1 5344-1 5542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15587-16235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5587-1 6235 bp Feature: domain Description: GIIM Note: maturase Location: 16286-16520 bp Feature: domain Description: GIIM Note: maturase Location: 1 6286-1 6520 bp Feature: domain Description: HNH Note: nucleases Location: 16772-16907 bp Feature: domain Description: HNH Note: nucleases Location: 1 6772-1 6907 bp Feature: gene Location: 17076-17435 bp Feature: domain Description: COG2331 Location: 17079-17298 bp Feature: domain Description: COG2331 Location: 1 7079-1 7298 bp Feature: gene Location: 17473-18159 bp Feature: domain Description: COG2928 Location: 17518-18124 bp Feature: domain Description: COG2928 Location: 1 751 8-1 81 24 bp Feature: gene Location: 98619-99344 bp Feature: domain Description: R_switched_YjbE Location: 98655-99192 bp Feature: domain Description: R_switched_YjbE Location: 98655-991 92 bp Feature: gene Location: 99483-100100 bp Feature: domain Description: PilA Location: 99597-99912 bp Feature: domain Description: PilA Location: 99597-9991 2 bp Feature: gene Location: 101461-103068 bp Feature: domain Description: RVT_N Location: 101464-101662 bp Feature: domain Description: RVT_N Location: 1 01 464-1 01 662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101707-102355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 707-1 02355 bp Feature: domain Description: GIIM Note: maturase Location: 102406-102640 bp Feature: domain Description: GIIM Note: maturase Location: 1 02406-1 02640 bp Feature: domain Description: HNHc Note: nucleases Location: 102883-103024 bp Feature: domain Description: HNHc Note: nucleases Location: 1 02883-1 03024 bp Feature: gene Location: 103193-104983 bp Feature: domain Description: PglL_A Location: 103700-103772 bp Feature: domain Description: PglL_A Location: 1 03700-1 03772 bp Feature: domain Description: Wzy_C Location: 103814-104282 bp Feature: domain Description: Wzy_C Location: 1 0381 4-1 04282 bp Feature: domain Description: Wzy_C_2 Location: 104348-104852 bp Feature: domain Description: Wzy_C_2 Location: 1 04348-1 04852 bp Feature: gene Location: 105087-105563 bp Feature: domain Description: moaC Location: 105093-105558 bp Feature: domain Description: moaC Location: 1 05093-1 05558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000014.1 (195781 bp)
Overview 1 RT 1: 94593-102601 bp 2 RT 2: 110422-117897 bp Neighborhood of RT #1 [94593, 102603] PRK10832 uvrC RVT_N RVT-GII GIIM HNHc EarP PRK00529 Neighborhood of RT #2 [110422, 117926] PRK10861 PRK10861 PRK05433 RVT_N RVT-GII GIIM HNHc DUF836 degP_htrA_DO Feature: gene Location: 94593-95183 bp Feature: domain Description: PRK10832 Location: 94596-95166 bp Feature: domain Description: PRK10832 Location: 94596-95166 bp Feature: gene Location: 95294-97486 bp Feature: domain Description: uvrC Location: 95384-97484 bp Feature: domain Description: uvrC Location: 95384-97484 bp Feature: gene Location: 97639-99240 bp Feature: domain Description: RVT_N Location: 97642-97840 bp Feature: domain Description: RVT_N Location: 97642 -97840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97885-98533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97885-98533 bp Feature: domain Description: GIIM Note: maturase Location: 98587-98818 bp Feature: domain Description: GIIM Note: maturase Location: 98587-98818 bp Feature: domain Description: HNHc Note: nucleases Location: 99049-99202 bp Feature: domain Description: HNHc Note: nucleases Location: 99049-992 02 bp Feature: gene Location: 100535-101716 bp Feature: domain Description: EarP Location: 100583-101699 bp Feature: domain Description: EarP Location: 100583-101699 bp Feature: gene Location: 102046-102603 bp Feature: domain Description: PRK00529 Location: 102049-102601 bp Feature: domain Description: PRK0052 9 Location: 102 049-102 601 bp Feature: gene Location: 110422-111315 bp Feature: domain Description: PRK10861 Location: 110431-110959 bp Feature: domain Description: PRK10861 Location: 110431-110959 bp Feature: domain Description: PRK10861 Location: 111154-111286 bp Feature: domain Description: PRK10861 Location: 111154-1112 86 bp Feature: gene Location: 111335-113128 bp Feature: domain Description: PRK05433 Location: 111338-113123 bp Feature: domain Description: PRK05433 Location: 111338-11312 3 bp Feature: gene Location: 113290-114843 bp Feature: domain Description: RVT_N Location: 113293-113443 bp Feature: domain Description: RVT_N Location: 1132 93-113443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113488-114136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113488-114136 bp Feature: domain Description: GIIM Note: maturase Location: 114190-114421 bp Feature: domain Description: GIIM Note: maturase Location: 114190-11442 1 bp Feature: domain Description: HNHc Note: nucleases Location: 114637-114805 bp Feature: domain Description: HNHc Note: nucleases Location: 114637-114805 bp Feature: gene Location: 116119-116388 bp Feature: domain Description: DUF836 Location: 116143-116356 bp Feature: domain Description: DUF836 Location: 116143-116356 bp Feature: gene Location: 116394-117926 bp Feature: domain Description: degP_htrA_DO Location: 116499-117897 bp Feature: domain Description: degP_htrA_DO Location: 116499-117897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000055.1 (62709 bp)
Overview 1 RT 1: 8732-14200 bp Neighborhood of RT #1 [8732, 14256] PRK05479 RVT_N RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 8732-9748 bp Feature: domain Description: PRK05479 Location: 8735-9716 bp Feature: domain Description: PRK05479 Location: 873 5-9716 bp Feature: gene Location: 9940-10248 bp Feature: gene Location: 10907-12607 bp Feature: domain Description: RVT_N Location: 10964-11207 bp Feature: domain Description: RVT_N Location: 10964-11207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11252-11900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11252-11900 bp Feature: domain Description: GIIM Note: maturase Location: 11954-12185 bp Feature: domain Description: GIIM Note: maturase Location: 11954-12185 bp Feature: domain Description: HNHc Note: nucleases Location: 12428-12569 bp Feature: domain Description: HNHc Note: nucleases Location: 12428-12569 bp Feature: gene Location: 12725-13363 bp Feature: domain Description: PRK05305 Location: 12749-13358 bp Feature: domain Description: PRK053 05 Location: 12749-13 3 58 bp Feature: gene Location: 13384-14256 bp Feature: domain Description: PssA Location: 13519-14200 bp Feature: domain Description: PssA Location: 13 519-14200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000009.1 (224633 bp)
Overview 1 RT 1: 198656-203328 bp Neighborhood of RT #1 [198656, 203328] PHA02517 InsE RVT_N RVT-GII GIIM Xcc1710_like Feature: gene Location: 198656-199621 bp Feature: domain Description: PHA02517 Location: 198707-199487 bp Feature: domain Description: PHA02517 Location: 198707-1994 87 bp Feature: gene Location: 199618-199935 bp Feature: domain Description: InsE Location: 199633-199909 bp Feature: domain Description: InsE Location: 199633-199909 bp Feature: gene Location: 199987-201396 bp Feature: domain Description: RVT_N Location: 200044-200287 bp Feature: domain Description: RVT_N Location: 20004 4 -200287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200332-200980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200332-200980 bp Feature: domain Description: GIIM Note: maturase Location: 201034-201265 bp Feature: domain Description: GIIM Note: maturase Location: 201034 -201265 bp Feature: gene Location: 202660-203034 bp Feature: domain Description: Xcc1710_like Location: 202699-203023 bp Feature: domain Description: Xcc1710_like Location: 202699-203023 bp Feature: gene Location: 203185-203328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000028.1 (115977 bp)
Overview 1 RT 1: 94767-98279 bp Neighborhood of RT #1 [94767, 98323] upstrm_HI1419 RVT-GII GIIM PRK08181 Feature: gene Location: 94767-95015 bp Feature: gene Location: 95040-95216 bp Feature: domain Description: upstrm_HI1419 Location: 95043-95172 bp Feature: domain Description: upstrm_HI1419 Location: 95 043-95 172 bp Feature: gene Location: 95528-96895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95855-96476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 85 5 -96476 bp Feature: domain Description: GIIM Note: maturase Location: 96527-96731 bp Feature: domain Description: GIIM Note: maturase Location: 965 27-96731 bp Feature: gene Location: 97019-97360 bp Feature: gene Location: 97508-98323 bp Feature: domain Description: PRK08181 Location: 97523-98279 bp Feature: domain Description: PRK08181 Location: 975 23-98279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000084.1 (37434 bp)
Overview 1 RT 1: 26450-29565 bp Neighborhood of RT #1 [26450, 29565] RVT-GII GIIM Feature: gene Location: 26450-26761 bp Feature: gene Location: 27373-27534 bp Feature: gene Location: 27568-29184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28339-28993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28339-28993 bp Feature: domain Description: GIIM Note: maturase Location: 29077-29179 bp Feature: domain Description: GIIM Note: maturase Location: 29077-29179 bp Feature: gene Location: 28864-29310 bp Feature: gene Location: 29374-29565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000080.1 (40595 bp)
Overview 1 RT 1: 1925-5672 bp Neighborhood of RT #1 [1925, 5672] DDE_Tnp_ISL3 HTH_Tnp_ISL3 RVT_N RVT-GII GIIM HNH Feature: gene Location: 1925-2758 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1997-2699 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1997 -2699 bp Feature: gene Location: 2768-3139 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3032-3134 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3032-3134 bp Feature: gene Location: 3051-4718 bp Feature: domain Description: RVT_N Location: 3096-3339 bp Feature: domain Description: RVT_N Location: 3096-3339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384-4026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384-4026 bp Feature: domain Description: GIIM Note: maturase Location: 4077-4311 bp Feature: domain Description: GIIM Note: maturase Location: 407 7 -4311 bp Feature: domain Description: HNH Note: nucleases Location: 4563-4689 bp Feature: domain Description: HNH Note: nucleases Location: 4563-4689 bp Feature: gene Location: 4846-4989 bp Feature: gene Location: 5256-5672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000112.1 (18692 bp)
Overview 1 RT 1: 3-4267 bp 2 RT 2: 6836-13197 bp Neighborhood of RT #1 [3, 4290] PotE RVT-GII GIIM 45_DOPA_Dioxygenase PRK06029 Neighborhood of RT #2 [6836, 13199] hemA OmpR RVT-GII GIIM KOG2413 Feature: gene Location: 3-827 bp Feature: domain Description: PotE Location: 42-699 bp Feature: domain Description: PotE Location: 42-699 bp Feature: gene Location: 1289-2656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1622-2237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1622-2237 bp Feature: domain Description: GIIM Note: maturase Location: 2297-2492 bp Feature: domain Description: GIIM Note: maturase Location: 2297-2492 bp Feature: gene Location: 2769-3554 bp Feature: domain Description: 45_DOPA_Dioxygenase Location: 2784-3543 bp Feature: domain Description: 45_DOPA_Dioxygenase Location: 278 4-3543 bp Feature: gene Location: 3691-4290 bp Feature: domain Description: PRK06029 Location: 3718-4267 bp Feature: domain Description: PRK06029 Location: 3718 -4267 bp Feature: gene Location: 6836-8125 bp Feature: domain Description: hemA Location: 6839-8108 bp Feature: domain Description: hemA Location: 68 39-8 108 bp Feature: gene Location: 8181-8738 bp Feature: domain Description: OmpR Location: 8205-8670 bp Feature: domain Description: OmpR Location: 8 205-8 670 bp Feature: gene Location: 9350-10672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9653-10292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9653-10292 bp Feature: domain Description: GIIM Note: maturase Location: 10367-10586 bp Feature: domain Description: GIIM Note: maturase Location: 10367-1058 6 bp Feature: gene Location: 11111-11365 bp Feature: gene Location: 11385-13199 bp Feature: domain Description: KOG2413 Location: 11427-13197 bp Feature: domain Description: KOG2413 Location: 11427-13197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNXA01000018.1 (176022 bp)
Overview 1 RT 1: 93724-101392 bp Neighborhood of RT #1 [93724, 101427] PRK05731 PRK12861 RVT_N RVT-GII GIIM HNHc RNase_Sa Barstar Feature: gene Location: 93724-94719 bp Feature: domain Description: PRK05731 Location: 93730-94708 bp Feature: domain Description: PRK05731 Location: 9 3730-9 4708 bp Feature: gene Location: 94970-97264 bp Feature: domain Description: PRK12861 Location: 94985-97259 bp Feature: domain Description: PRK12861 Location: 9 49 85-9 7259 bp Feature: gene Location: 98755-100308 bp Feature: domain Description: RVT_N Location: 98758-98908 bp Feature: domain Description: RVT_N Location: 9 8758-9 89 08 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98953-99601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 89 53-9 9 601 bp Feature: domain Description: GIIM Note: maturase Location: 99652-99886 bp Feature: domain Description: GIIM Note: maturase Location: 9 9 652-9 9 886 bp Feature: domain Description: HNHc Note: nucleases Location: 100105-100270 bp Feature: domain Description: HNHc Note: nucleases Location: 100105-100270 bp Feature: gene Location: 100449-100850 bp Feature: domain Description: RNase_Sa Location: 100569-100842 bp Feature: domain Description: RNase_Sa Location: 100569 -100842 bp Feature: gene Location: 100867-101427 bp Feature: domain Description: Barstar Location: 101152-101392 bp Feature: domain Description: Barstar Location: 101152-10139 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT