myRT

myRT report for GCA_900108515.1_IMG-taxon_2651870103_annotated_assembly

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Seq: FNWW01000018.1 (27049 bp)
Overview 1 RT 1: 550-3928 bp Neighborhood of RT #1 [550, 3928] group_II_RT_mat RVT-GII HNHc Feature: gene Location: 550-765 bp Feature: gene Location: 1633-1959 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1720-1909 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 720-1 909 bp Feature: gene Location: 2058-3128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064-2601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064-2601 bp Feature: gene Location: 3151-3429 bp Feature: domain Description: HNHc Note: nucleases Location: 3163-3298 bp Feature: domain Description: HNHc Note: nucleases Location: 31 63-3298 bp Feature: gene Location: 3800-3928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, HNHc (smart00507)

Seq: FNWW01000024.1 (1451 bp)
Overview 1 RT 1: 1-1366 bp Neighborhood of RT #1 [1, 1449] RVT-GII Intron_maturas2 Feature: gene Location: 1-1449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133-967 bp Feature: domain Description: Intron_maturas2 Location: 1039-1366 bp Feature: domain Description: Intron_maturas2 Location: 1039-1366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: FNWW01000016.1 (42144 bp)
Overview 1 RT 1: 642-4106 bp Neighborhood of RT #1 [642, 4123] Lysozyme_like RVT-GII HNHc CwlT_like Feature: gene Location: 642-773 bp Feature: gene Location: 806-1018 bp Feature: domain Description: Lysozyme_like Location: 842-1010 bp Feature: domain Description: Lysozyme_like Location: 842-1010 bp Feature: gene Location: 1097-2875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1355-2066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 55-2066 bp Feature: domain Description: HNHc Note: nucleases Location: 2660-2765 bp Feature: domain Description: HNHc Note: nucleases Location: 2660-2765 bp Feature: gene Location: 3110-3313 bp Feature: gene Location: 3647-4123 bp Feature: domain Description: CwlT_like Location: 3860-4106 bp Feature: domain Description: CwlT_like Location: 3 860-4106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507), CwlT_like

Seq: FNWW01000002.1 (424874 bp)
Overview 1 RT 1: 79212-84021 bp Neighborhood of RT #1 [79212, 84047] PRK00648 RadC RVT-GII Intron_maturas2 PRK00024 GDPD Feature: gene Location: 79212-79928 bp Feature: domain Description: PRK00648 Location: 79365-79914 bp Feature: domain Description: PRK0064 8 Location: 79365-79914 bp Feature: gene Location: 79961-80545 bp Feature: domain Description: RadC Location: 80000-80525 bp Feature: domain Description: RadC Location: 80000-80525 bp Feature: gene Location: 81030-82520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81348-82056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8134 8-82056 bp Feature: domain Description: Intron_maturas2 Location: 82221-82413 bp Feature: domain Description: Intron_maturas2 Location: 82221-824 13 bp Feature: gene Location: 82706-82894 bp Feature: domain Description: PRK00024 Location: 82757-82889 bp Feature: domain Description: PRK00024 Location: 82757-82889 bp Feature: gene Location: 83208-84047 bp Feature: domain Description: GDPD Location: 83334-84021 bp Feature: domain Description: GDPD Location: 83334 -84 021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00648 (Maf-like protein; Reviewed), RadC (pfam04002), RVT-GII, Intron_maturas2 (pfam01348), PRK00024 (DNA repair protein RadC), GDPD (pfam03009)

Seq: FNWW01000023.1 (1451 bp)
Overview 1 RT 1: 3-1380 bp Neighborhood of RT #1 [3, 1448] RVT-GII Intron_maturas2 Feature: gene Location: 3-1448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132-966 bp Feature: domain Description: Intron_maturas2 Location: 1038-1380 bp Feature: domain Description: Intron_maturas2 Location: 1038-1380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: FNWW01000006.1 (286364 bp)
Overview 1 RT 1: 894-4690 bp Neighborhood of RT #1 [894, 4690] SLATT_5 RVT-UG17 Feature: gene Location: 894-1103 bp Feature: gene Location: 1302-1946 bp Feature: domain Description: SLATT_5 Location: 1389-1935 bp Feature: domain Description: SLATT_5 Location: 1389-1935 bp Feature: gene Location: 1949-3334 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2186-2777 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2186 -2777 bp Feature: gene Location: 3691-3933 bp Feature: gene Location: 4085-4690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: FNWW01000001.1 (1065855 bp)
Overview 1 RT 1: 626503-629098 bp Neighborhood of RT #1 [626503, 629098] RVT-GII Feature: gene Location: 626503-626691 bp Feature: gene Location: 626876-627070 bp Feature: gene Location: 627330-628391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627588-628287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627 588-628287 bp Feature: gene Location: 628515-628664 bp Feature: gene Location: 628706-629098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FNWW01000017.1 (36858 bp)
Overview 1 RT 1: 29750-34087 bp Neighborhood of RT #1 [29750, 34230] MobL RVT-GII HNHc MobL arc_metj Feature: gene Location: 29750-30178 bp Feature: gene Location: 30187-30930 bp Feature: domain Description: MobL Location: 30238-30865 bp Feature: domain Description: MobL Location: 30238 -308 65 bp Feature: gene Location: 30986-32788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31280-31979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3128 0-31979 bp Feature: domain Description: HNHc Note: nucleases Location: 32540-32678 bp Feature: domain Description: HNHc Note: nucleases Location: 32540-32678 bp Feature: gene Location: 33485-33976 bp Feature: domain Description: MobL Location: 33503-33950 bp Feature: domain Description: MobL Location: 33503-33950 bp Feature: gene Location: 33973-34230 bp Feature: domain Description: arc_metj Location: 33994-34087 bp Feature: domain Description: arc_metj Location: 33994-3408 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobL (pfam18555), RVT-GII, HNHc (smart00507), arc_metj (LOAD_arc_metj)