myRT

myRT report for GCA_900108935.1_IMG-taxon_2597490345_annotated_assembly

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Seq: FNYP01000042.1 (39543 bp)
Overview 1 RT 1: 2-1287 bp Neighborhood of RT #1 [2, 1295] RVT-GII GIIM MazF DUF3018 Feature: gene Location: 2-655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-236 bp Feature: domain Description: GIIM Note: maturase Location: 290-506 bp Feature: domain Description: GIIM Note: maturase Location: 290-506 bp Feature: gene Location: 955-1158 bp Feature: domain Description: MazF Location: 958-1069 bp Feature: domain Description: MazF Location: 958-1 069 bp Feature: gene Location: 1155-1295 bp Feature: domain Description: DUF3018 Location: 1158-1287 bp Feature: domain Description: DUF301 8 Location: 1 1 58-1 287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MazF (COG2337), DUF3018 (pfam11455)

Seq: FNYP01000026.1 (92124 bp)
Overview 1 RT 1: 88488-91974 bp Neighborhood of RT #1 [88488, 92123] hutH PRK09356 RVT-GII GIIM Feature: gene Location: 88488-90023 bp Feature: domain Description: hutH Location: 88497-90012 bp Feature: domain Description: hutH Location: 88497-90012 bp Feature: gene Location: 90020-91390 bp Feature: domain Description: PRK09356 Location: 90179-91382 bp Feature: domain Description: PRK09356 Location: 90179-91382 bp Feature: gene Location: 91470-92123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91473-91704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91473-91704 bp Feature: domain Description: GIIM Note: maturase Location: 91758-91974 bp Feature: domain Description: GIIM Note: maturase Location: 91758-91974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hutH (TIGR01225), PRK09356 (imidazolonepropionase; Validated), RVT-GII, GIIM (pfam08388)

Seq: FNYP01000094.1 (9429 bp)
Overview 1 RT 1: 2782-5987 bp Neighborhood of RT #1 [2782, 5987] DDE_3 RVT-GII Feature: gene Location: 2782-3189 bp Feature: gene Location: 3459-3992 bp Feature: domain Description: DDE_3 Location: 3474-3729 bp Feature: domain Description: DDE_3 Location: 3 474-3 729 bp Feature: gene Location: 4005-4997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4221-4875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4221-4875 bp Feature: gene Location: 5151-5441 bp Feature: gene Location: 5664-5987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII

Seq: FNYP01000011.1 (177854 bp)
Overview 1 RT 1: 175507-177853 bp Neighborhood of RT #1 [175507, 177852] AraJ RVT-GII Feature: gene Location: 175507-176691 bp Feature: domain Description: AraJ Location: 175510-176668 bp Feature: domain Description: AraJ Location: 175510-176668 bp Feature: gene Location: 176639-176929 bp Feature: gene Location: 177160-177852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177487-177853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1774 87-177853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), RVT-GII

Seq: FNYP01000117.1 (6519 bp)
Overview 1 RT 1: 3-5809 bp Neighborhood of RT #1 [3, 6177] InsE RVT-GII GIIM Transposase_mut DUF772 DDE_Tnp_1 Transposase_mut RVT-GII Feature: gene Location: 3-257 bp Feature: domain Description: InsE Location: 48-219 bp Feature: domain Description: InsE Location: 48-219 bp Feature: gene Location: 491-2008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-15 5 6 bp Feature: domain Description: GIIM Note: maturase Location: 1625-1895 bp Feature: domain Description: GIIM Note: maturase Location: 1625 -1895 bp Feature: gene Location: 2138-2395 bp Feature: domain Description: Transposase_mut Location: 2144-2369 bp Feature: domain Description: Transposase_mut Location: 2144-2369 bp Feature: gene Location: 2421-3818 bp Feature: domain Description: DUF772 Location: 2580-2799 bp Feature: domain Description: DUF772 Location: 25 80-2799 bp Feature: domain Description: DDE_Tnp_1 Location: 3018-3690 bp Feature: domain Description: DDE_Tnp_1 Location: 3018-3690 bp Feature: gene Location: 3862-4308 bp Feature: domain Description: Transposase_mut Location: 3865-4222 bp Feature: domain Description: Transposase_mut Location: 3865 -4222 bp Feature: gene Location: 4768-6177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5122-5809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 122-5 809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)