myRT

myRT report for GCA_900109015.1_IMG-taxon_2599185305_annotated_assembly

Download annotations/find similar RTs

Seq: FNYG01000002.1 (557747 bp)
Overview 1 RT 1: 388367-394327 bp Neighborhood of RT #1 [388367, 394329] YdjC_EF3048_like KOG4391 RVT-GII GIIM UgpB DUF2160 Feature: gene Location: 388367-389161 bp Feature: domain Description: YdjC_EF3048_like Location: 388382-389027 bp Feature: domain Description: YdjC_EF3048_like Location: 388382-389027 bp Feature: gene Location: 389340-390224 bp Feature: domain Description: KOG4391 Location: 389511-390156 bp Feature: domain Description: KOG4391 Location: 38951 1 -3901 56 bp Feature: gene Location: 390373-391692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390634-391249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390634-391 249 bp Feature: domain Description: GIIM Note: maturase Location: 391303-391531 bp Feature: domain Description: GIIM Note: maturase Location: 391 303-391 531 bp Feature: gene Location: 392263-394005 bp Feature: domain Description: UgpB Location: 392302-393829 bp Feature: domain Description: UgpB Location: 392302-393829 bp Feature: gene Location: 394054-394329 bp Feature: domain Description: DUF2160 Location: 394066-394327 bp Feature: domain Description: DUF21 60 Location: 394066-394327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdjC_EF3048_like (cd10803), KOG4391 (KOG4391, Predicted alpha/beta hydrolase BEM46 ), RVT-GII, GIIM (pfam08388), UgpB (COG1653), DUF2160 (pfam09928)

Seq: FNYG01000020.1 (124265 bp)
Overview 1 RT 1: 50398-59052 bp Neighborhood of RT #1 [50398, 59052] pfam13191 TPR TPR_19 RVT-GII DDE_Tnp_IS66_C Feature: gene Location: 50398-56445 bp Feature: domain Description: pfam13191 Location: 51199-51592 bp Feature: domain Description: pfam13191 Location: 51199-51592 bp Feature: domain Description: TPR Location: 52210-53452 bp Feature: domain Description: TPR Location: 52 2 10-53452 bp Feature: domain Description: TPR_19 Location: 53635-53797 bp Feature: domain Description: TPR_19 Location: 53635-53797 bp Feature: gene Location: 56568-56717 bp Feature: gene Location: 56917-57582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56959-57208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56959-572 08 bp Feature: gene Location: 57802-57942 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 57808-57919 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 57808-57919 bp Feature: gene Location: 58435-59052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam13191 (AAA_16;AAA ATPase domain), TPR (smart00028), TPR_19 (pfam14559), RVT-GII, DDE_Tnp_IS66_C (pfam13817)