myRT

myRT report for GCA_900109255.1_IMG-taxon_2651870114_annotated_assembly

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Seq: FNZH01000009.1 (153581 bp)
Overview 1 RT 1: 430-5864 bp Neighborhood of RT #1 [430, 5864] RVT-GII GIIM COG3177 RVT-GII Feature: gene Location: 430-591 bp Feature: gene Location: 730-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1 438 bp Feature: domain Description: GIIM Note: maturase Location: 1522-1696 bp Feature: domain Description: GIIM Note: maturase Location: 1 522-1 696 bp Feature: gene Location: 2047-3180 bp Feature: domain Description: COG3177 Location: 2059-3136 bp Feature: domain Description: COG31 77 Location: 2059-31 36 bp Feature: gene Location: 3224-3352 bp Feature: gene Location: 4244-4453 bp Feature: gene Location: 4556-4732 bp Feature: gene Location: 4755-5126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4758-5103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4758-51 03 bp Feature: gene Location: 5477-5620 bp Feature: gene Location: 5736-5864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNZH01000006.1 (220883 bp)
Overview 1 RT 1: 217840-220882 bp Neighborhood of RT #1 [217840, 220882] DUF2141 cNMP_binding RVT-GII GIIM RVT-GII Feature: gene Location: 217840-218262 bp Feature: domain Description: DUF2141 Location: 217927-218236 bp Feature: domain Description: DUF2 141 Location: 2 1792 7-2 182 36 bp Feature: gene Location: 218344-218913 bp Feature: domain Description: cNMP_binding Location: 218434-218686 bp Feature: domain Description: cNMP_binding Location: 2 18434-2 18686 bp Feature: gene Location: 219089-219940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219101-219581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 19101-2 19581 bp Feature: domain Description: GIIM Note: maturase Location: 219668-219839 bp Feature: domain Description: GIIM Note: maturase Location: 2 19668-2 19839 bp Feature: gene Location: 220019-220357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220280-220355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 02 80-2 2 0355 bp Feature: gene Location: 220643-220882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNZH01000022.1 (7703 bp)
Overview 1 RT 1: 94-2442 bp Neighborhood of RT #1 [94, 2447] RVT-GII GIIM COG3324 Feature: gene Location: 94-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 07-967 bp Feature: domain Description: GIIM Note: maturase Location: 1051-1267 bp Feature: domain Description: GIIM Note: maturase Location: 1051-1267 bp Feature: gene Location: 1556-1849 bp Feature: gene Location: 1953-2447 bp Feature: domain Description: COG3324 Location: 2079-2442 bp Feature: domain Description: COG3 3 24 Location: 2079-2442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNZH01000003.1 (903865 bp)
Overview 1 RT 1: 557607-560788 bp Neighborhood of RT #1 [557607, 560793] TlpA_like_family Fib_succ_major RVT-DGRs Fib_succ_major Feature: gene Location: 557607-559004 bp Feature: domain Description: TlpA_like_family Location: 558627-558933 bp Feature: domain Description: TlpA_like_family Location: 558627-558933 bp Feature: gene Location: 559016-559249 bp Feature: domain Description: Fib_succ_major Location: 559046-559217 bp Feature: domain Description: Fib_succ_major Location: 55904 6-559217 bp Feature: gene Location: 559264-559593 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 559417-559537 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5594 17-559537 bp Feature: gene Location: 559625-559987 bp Feature: gene Location: 560263-560793 bp Feature: domain Description: Fib_succ_major Location: 560296-560788 bp Feature: domain Description: Fib_succ_major Location: 560296-560788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNZH01000023.1 (7119 bp)
Overview 1 RT 1: 94-2562 bp Neighborhood of RT #1 [94, 2562] RVT-GII GIIM Feature: gene Location: 94-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-967 bp Feature: domain Description: GIIM Note: maturase Location: 1051-1267 bp Feature: domain Description: GIIM Note: maturase Location: 105 1-1267 bp Feature: gene Location: 1563-1901 bp Feature: gene Location: 1945-2562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FNZH01000018.1 (13049 bp)
Overview 1 RT 1: 8527-12783 bp Neighborhood of RT #1 [8527, 12836] Cmr6_III-B Cas6b_N Cas6b_C RVT-Retrons Cas1_I-II-III cas2 Feature: gene Location: 8527-9732 bp Feature: domain Description: Cmr6_III-B Location: 8629-9352 bp Feature: domain Description: Cmr6 _III-B Location: 86 29-9352 bp Feature: gene Location: 9729-10499 bp Feature: domain Description: Cas6b_N Location: 9945-10089 bp Feature: domain Description: Cas6 b_N Location: 9945-10089 bp Feature: domain Description: Cas6b_C Location: 10137-10467 bp Feature: domain Description: Cas6 b_C Location: 10137-1046 7 bp Feature: gene Location: 10503-11549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10653-11220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 106 53-11220 bp Feature: gene Location: 11549-12547 bp Feature: domain Description: Cas1_I-II-III Location: 11552-12515 bp Feature: domain Description: Cas1_I-II-III Location: 11552-12515 bp Feature: gene Location: 12525-12836 bp Feature: domain Description: cas2 Location: 12528-12783 bp Feature: domain Description: cas2 Location: 12528-12783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT