myRT

myRT report for GCA_900109385.1_IMG-taxon_2593339226_annotated_assembly

Download annotations/find similar RTs

Seq: FOAL01000004.1 (414449 bp)
Overview 1 RT 1: 87827-92530 bp Neighborhood of RT #1 [87827, 92532] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 87827-87958 bp Feature: gene Location: 87980-88441 bp Feature: domain Description: Bac_Flav_CT_G Location: 87998-88424 bp Feature: domain Description: Bac_Flav_CT_G Location: 87998-88424 bp Feature: gene Location: 88519-90330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88783-89605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88783-89605 bp Feature: domain Description: Intron_maturas2 Location: 89710-89983 bp Feature: domain Description: Intron_maturas2 Location: 8971 0-89983 bp Feature: domain Description: HNHc Note: nucleases Location: 90151-90301 bp Feature: domain Description: HNHc Note: nucleases Location: 901 51 -90301 bp Feature: gene Location: 90417-90578 bp Feature: gene Location: 90949-92532 bp Feature: domain Description: Bac_Flav_CT_G Location: 90955-92530 bp Feature: domain Description: Bac_Flav_CT_G Location: 90955-92530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FOAL01000005.1 (405080 bp)
Overview 1 RT 1: 90730-99405 bp 2 RT 2: 231132-236511 bp Neighborhood of RT #1 [90730, 99866] DUF4134 RVT-GII Intron_maturas2 HNHc DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF3876 DUF4141 Neighborhood of RT #2 [231132, 236522] DUF3876 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 90730-91026 bp Feature: domain Description: DUF4134 Location: 90748-91021 bp Feature: domain Description: DUF4134 Location: 90748-9102 1 bp Feature: gene Location: 91308-91712 bp Feature: gene Location: 91651-93468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91915-92737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91915-92 737 bp Feature: domain Description: Intron_maturas2 Location: 92812-93139 bp Feature: domain Description: Intron_maturas2 Location: 92 812 -93139 bp Feature: domain Description: HNHc Note: nucleases Location: 93292-93442 bp Feature: domain Description: HNHc Note: nucleases Location: 932 92 -93442 bp Feature: gene Location: 93501-93860 bp Feature: domain Description: DUF4133 Location: 93582-93810 bp Feature: domain Description: DUF4133 Location: 93582 -93810 bp Feature: gene Location: 93857-96253 bp Feature: domain Description: Bac_Flav_CT_G Location: 93860-96245 bp Feature: domain Description: Bac_Flav_CT_G Location: 93860-962 45 bp Feature: gene Location: 96823-98646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97087-97909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97087-97909 bp Feature: domain Description: Intron_maturas2 Location: 98083-98326 bp Feature: domain Description: Intron_maturas2 Location: 98083-9832 6 bp Feature: domain Description: HNHc Note: nucleases Location: 98437-98608 bp Feature: domain Description: HNHc Note: nucleases Location: 98437-98608 bp Feature: gene Location: 98890-99240 bp Feature: domain Description: DUF3876 Location: 98947-99214 bp Feature: domain Description: DUF3876 Location: 98947-992 14 bp Feature: gene Location: 99240-99866 bp Feature: domain Description: DUF4141 Location: 99252-99405 bp Feature: domain Description: DUF4141 Location: 992 52 -99405 bp Feature: gene Location: 231132-231506 bp Feature: domain Description: DUF3876 Location: 231210-231480 bp Feature: domain Description: DUF3876 Location: 2 312 10-2 31480 bp Feature: gene Location: 231530-231973 bp Feature: domain Description: Bac_Flav_CT_G Location: 231542-231956 bp Feature: domain Description: Bac_Flav_CT_G Location: 2 31542 -2 31956 bp Feature: gene Location: 232077-233903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232362-233184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 362 -2 33184 bp Feature: domain Description: Intron_maturas2 Location: 233256-233580 bp Feature: domain Description: Intron_maturas2 Location: 2 332 56-2 33580 bp Feature: domain Description: HNHc Note: nucleases Location: 233733-233880 bp Feature: domain Description: HNHc Note: nucleases Location: 2 33733-2 33880 bp Feature: gene Location: 234120-234314 bp Feature: gene Location: 234429-236522 bp Feature: domain Description: Bac_Flav_CT_G Location: 234432-236511 bp Feature: domain Description: Bac_Flav_CT_G Location: 2 34432 -2 36511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FOAL01000003.1 (530276 bp)
Overview 1 RT 1: 389919-401760 bp Neighborhood of RT #1 [389919, 401876] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF3320 rpsA Feature: gene Location: 389919-390119 bp Feature: gene Location: 390521-392707 bp Feature: gene Location: 392913-394046 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 393237-393789 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 93 23 7-3 93 789 bp Feature: gene Location: 394080-399908 bp Feature: domain Description: DUF4011 Location: 395235-395748 bp Feature: domain Description: DUF4011 Location: 3 9523 5-3 95748 bp Feature: domain Description: DEXXQc_SF1 Location: 396087-396687 bp Feature: domain Description: DEXXQc_SF1 Location: 3 96087-3 96687 bp Feature: domain Description: DEXXQc_SF1 Location: 397524-398274 bp Feature: domain Description: DEXXQc_SF1 Location: 3 97524-3 98274 bp Feature: domain Description: SF1_C_Upf1 Location: 398283-398796 bp Feature: domain Description: SF1_C_Upf1 Location: 3 98283 -3 98796 bp Feature: domain Description: MTES_1575 Location: 398946-399234 bp Feature: domain Description: MTES_1575 Location: 3 98946-3 9923 4 bp Feature: domain Description: DUF3320 Location: 399414-399558 bp Feature: domain Description: DUF3 3 20 Location: 3 99414-3 99558 bp Feature: gene Location: 400077-401876 bp Feature: domain Description: rpsA Location: 400146-401760 bp Feature: domain Description: rpsA Location: 400146-401760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT