myRT

myRT report for GCA_900109725.1_IMG-taxon_2617270880_annotated_assembly

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Seq: FOBC01000034.1 (10694 bp)
Overview 1 RT 1: 5411-10171 bp Neighborhood of RT #1 [5411, 10197] AtoC RVT-GII RVT-GII GIIM InsE InsE HTH_23 PHA02517 Feature: gene Location: 5411-6823 bp Feature: domain Description: AtoC Location: 5498-6779 bp Feature: domain Description: AtoC Location: 5498-6779 bp Feature: gene Location: 6857-7099 bp Feature: gene Location: 7379-8080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7979-8066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7979-8066 bp Feature: gene Location: 8142-9026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8148-8640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 48-8640 bp Feature: domain Description: GIIM Note: maturase Location: 8718-8946 bp Feature: domain Description: GIIM Note: maturase Location: 871 8-8946 bp Feature: gene Location: 9121-9741 bp Feature: domain Description: InsE Location: 9136-9295 bp Feature: domain Description: InsE Location: 91 36-9295 bp Feature: domain Description: InsE Location: 9310-9568 bp Feature: domain Description: InsE Location: 931 0-9568 bp Feature: domain Description: HTH_23 Location: 9643-9736 bp Feature: domain Description: HTH_23 Location: 9643-9736 bp Feature: gene Location: 9763-10197 bp Feature: domain Description: PHA02517 Location: 9934-10171 bp Feature: domain Description: PHA0251 7 Location: 9934-1 01 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AtoC (COG2204), RVT-GII, GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), PHA02517 (putative transposase OrfB; Reviewed)

Seq: FOBC01000014.1 (97488 bp)
Overview 1 RT 1: 68466-73644 bp Neighborhood of RT #1 [68466, 73730] AbrB RVT-GII GIIM ALDH_F6_MMSDH LysR Feature: gene Location: 68466-68696 bp Feature: domain Description: AbrB Location: 68481-68667 bp Feature: domain Description: AbrB Location: 68481-68667 bp Feature: gene Location: 68815-69033 bp Feature: gene Location: 69106-70494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69430-70048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69430-70048 bp Feature: domain Description: GIIM Note: maturase Location: 70099-70315 bp Feature: domain Description: GIIM Note: maturase Location: 70099-70315 bp Feature: gene Location: 71017-72516 bp Feature: domain Description: ALDH_F6_MMSDH Location: 71038-72463 bp Feature: domain Description: ALDH_F6_MMSDH Location: 71038-72 463 bp Feature: gene Location: 72756-73730 bp Feature: domain Description: LysR Location: 72762-73644 bp Feature: domain Description: LysR Location: 72 762 -73644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), RVT-GII, GIIM (pfam08388), ALDH_F6_MMSDH (cd07085), LysR (COG0583)

Seq: FOBC01000026.1 (50137 bp)
Overview 1 RT 1: 17574-22530 bp Neighborhood of RT #1 [17574, 22530] InsQ RVT-GII GIIM phasin_3 Feature: gene Location: 17574-18689 bp Feature: domain Description: InsQ Location: 18192-18642 bp Feature: domain Description: InsQ Location: 18192-18642 bp Feature: gene Location: 19233-19619 bp Feature: gene Location: 19618-20994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19942-20560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19942-20560 bp Feature: domain Description: GIIM Note: maturase Location: 20611-20827 bp Feature: domain Description: GIIM Note: maturase Location: 20611-20827 bp Feature: gene Location: 20760-21896 bp Feature: domain Description: phasin_3 Location: 21519-21819 bp Feature: domain Description: phasin_3 Location: 21519-21819 bp Feature: gene Location: 22270-22530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), phasin_3 (TIGR02809)