myRT

myRT report for GCA_900109755.1_IMG-taxon_2667527210_annotated_assembly

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Seq: FOAR01000004.1 (290626 bp)
Overview 1 RT 1: 150075-152097 bp 2 RT 2: 172441-178949 bp Neighborhood of RT #1 [150075, 152097] RVT-Retrons Neighborhood of RT #2 [172441, 178972] COG4951 SSL2 RVT-UG2 HTH_28 LysR Feature: gene Location: 150075-150272 bp Feature: gene Location: 150404-150658 bp Feature: gene Location: 150734-151603 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150869-151439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 50869-1 51 439 bp Feature: gene Location: 151628-151786 bp Feature: gene Location: 151798-152097 bp Feature: gene Location: 172441-174939 bp Feature: domain Description: COG4951 Location: 172558-173698 bp Feature: domain Description: COG4951 Location: 1 72558-1 73698 bp Feature: domain Description: SSL2 Location: 173776-174886 bp Feature: domain Description: SSL2 Location: 1 73776-1 74886 bp Feature: gene Location: 174962-175117 bp Feature: gene Location: 175578-176855 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 175770-176556 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 75770-1 76556 bp Feature: gene Location: 177305-177991 bp Feature: domain Description: HTH_28 Location: 177314-177410 bp Feature: domain Description: HTH_28 Location: 1 7731 4-1 7741 0 bp Feature: gene Location: 178085-178972 bp Feature: domain Description: LysR Location: 178091-178949 bp Feature: domain Description: LysR Location: 1 78091 -1 78949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG4951 (Uncharacterized protein ), SSL2 (COG1061), RVT-UG2, HTH_28 (pfam13518), LysR (COG0583)

Seq: FOAR01000020.1 (108302 bp)
Overview 1 RT 1: 35587-43331 bp Neighborhood of RT #1 [35587, 43336] DotA_TraY RVT-Retrons INT_Rci_Hp1_C PRK05408 Feature: gene Location: 35587-37851 bp Feature: domain Description: DotA_TraY Location: 35698-37630 bp Feature: domain Description: DotA_TraY Location: 35698-37630 bp Feature: gene Location: 38962-39189 bp Feature: gene Location: 39711-41447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39885-40482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39885-40482 bp Feature: gene Location: 41670-42788 bp Feature: domain Description: INT_Rci_Hp1_C Location: 42207-42711 bp Feature: domain Description: INT_Rci_Hp1_C Location: 42 2 07-42 711 bp Feature: gene Location: 43064-43336 bp Feature: domain Description: PRK05408 Location: 43067-43331 bp Feature: domain Description: PRK05408 Location: 43067-43331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DotA_TraY (TIGR04346), RVT-Retrons, INT_Rci_Hp1_C (cd00796), PRK05408 (oxidative damage protection protein; Provisional)