myRT

myRT report for GCA_900111605.1_IMG-taxon_2671180135_annotated_assembly

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Seq: FOIA01000067.1 (2957 bp)
Overview 1 RT 1: 84-2390 bp Neighborhood of RT #1 [84, 2887] RVT-UG13 Feature: gene Location: 84-434 bp Feature: gene Location: 855-1322 bp Feature: gene Location: 1511-2887 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 1928-2390 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 928-2390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13

Seq: FOIA01000047.1 (15503 bp)
Overview 1 RT 1: 8831-12041 bp Neighborhood of RT #1 [8831, 12064] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III ParE_toxin Feature: gene Location: 8831-8983 bp Feature: gene Location: 8987-9133 bp Feature: gene Location: 9289-11394 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9511-10111 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9511-10111 bp Feature: domain Description: Cas1_I-II-III Location: 10399-11353 bp Feature: domain Description: Cas1_I-II-III Location: 10399-11353 bp Feature: gene Location: 11396-11674 bp Feature: domain Description: Cas2_I_II_III Location: 11405-11600 bp Feature: domain Description: Cas2 _I_II_III Location: 11405-11600 bp Feature: gene Location: 11771-12064 bp Feature: domain Description: ParE_toxin Location: 11789-12041 bp Feature: domain Description: ParE_toxin Location: 11789-12 041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), ParE_toxin (pfam05016)

Seq: FOIA01000003.1 (155701 bp)
Overview 1 RT 1: 153128-155296 bp Neighborhood of RT #1 [153128, 155517] VOC RVT-GII GIIM Feature: gene Location: 153128-153277 bp Feature: gene Location: 153390-153800 bp Feature: domain Description: VOC Location: 153429-153783 bp Feature: domain Description: VOC Location: 153 429-153 783 bp Feature: gene Location: 153964-155517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154264-154996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154264-154996 bp Feature: domain Description: GIIM Note: maturase Location: 155071-155296 bp Feature: domain Description: GIIM Note: maturase Location: 155071-155296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC (cl14632), RVT-GII, GIIM (pfam08388)

Seq: FOIA01000024.1 (53042 bp)
Overview 1 RT 1: 39559-41940 bp Neighborhood of RT #1 [39559, 41963] RVT-GII heterocyst_DevA Feature: gene Location: 39559-39723 bp Feature: gene Location: 39916-40056 bp Feature: gene Location: 40086-40727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40371-40611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0371-4 0611 bp Feature: gene Location: 40869-41102 bp Feature: gene Location: 41280-41963 bp Feature: domain Description: heterocyst_DevA Location: 41286-41940 bp Feature: domain Description: heterocyst_DevA Location: 4 1286-4 194 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, heterocyst_DevA (TIGR02982)

Seq: FOIA01000077.1 (1975 bp)
Overview 1 RT 1: 85-1972 bp Neighborhood of RT #1 [85, 1972] RVT-GII GIIM Feature: gene Location: 85-1485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-105 4 bp Feature: domain Description: GIIM Note: maturase Location: 1126-1345 bp Feature: domain Description: GIIM Note: maturase Location: 1126-1345 bp Feature: gene Location: 1634-1972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FOIA01000033.1 (35772 bp)
Overview 1 RT 1: 5611-10824 bp Neighborhood of RT #1 [5611, 10824] TIR_2 AAA_16 YfmG RVT-DGRs Avd_like Feature: gene Location: 5611-5757 bp Feature: gene Location: 6086-9157 bp Feature: domain Description: TIR_2 Location: 6098-6434 bp Feature: domain Description: TIR_2 Location: 6 098-6 434 bp Feature: domain Description: AAA_16 Location: 6653-7157 bp Feature: domain Description: AAA_16 Location: 6 6 53-7157 bp Feature: domain Description: YfmG Location: 8405-9140 bp Feature: domain Description: YfmG Location: 8405-9140 bp Feature: gene Location: 9200-10321 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9419-10067 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9419-1006 7 bp Feature: gene Location: 10315-10659 bp Feature: domain Description: Avd_like Location: 10339-10648 bp Feature: domain Description: Avd_like Location: 10339-106 48 bp Feature: gene Location: 10687-10824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), AAA_16 (pfam13191), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)