myRT

myRT report for GCA_900112395.1_IMG-taxon_2634166310_annotated_assembly

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Seq: FOLN01000002.1 Algibacter lectus strain DSM 15365 genome assembly, contig: Ga0074818_102, whole genome shotgun sequence (647953 bp)
Overview 1 RT 1: 184499-190062 bp Neighborhood of RT #1 [184499, 190178] LytT VirE_N RVT-UG28b IU_nuc_hydro Feature: gene Location: 184499-185248 bp Feature: domain Description: LytT Location: 184502-185234 bp Feature: domain Description: LytT Location: 1 84502-1 85234 bp Feature: gene Location: 185357-186319 bp Feature: domain Description: VirE_N Location: 185516-185870 bp Feature: domain Description: VirE_N Location: 1 8551 6-1 85870 bp Feature: gene Location: 186580-188346 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 187039-187741 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1 87039-1 87741 bp Feature: gene Location: 188548-188967 bp Feature: gene Location: 189195-190178 bp Feature: domain Description: IU_nuc_hydro Location: 189342-190062 bp Feature: domain Description: IU_nuc_hydro Location: 1 89342-1 90062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LytT (COG3279), VirE_N (pfam08800), RVT-UG28b, IU_nuc_hydro (pfam01156)

Seq: FOLN01000012.1 Algibacter lectus strain DSM 15365 genome assembly, contig: Ga0074818_112, whole genome shotgun sequence (144364 bp)
Overview 1 RT 1: 473-9882 bp Neighborhood of RT #1 [473, 9887] WGR_DNA_ligase RVT-Retrons TPR_12 TPR_12 TPR_12 COG4585 NrdG Feature: gene Location: 473-3523 bp Feature: domain Description: WGR_DNA_ligase Location: 497-716 bp Feature: domain Description: WGR_DNA_ligase Location: 497-716 bp Feature: gene Location: 3528-5156 bp Feature: gene Location: 5418-6938 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5970-6585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5970-6585 bp Feature: gene Location: 7157-9172 bp Feature: domain Description: TPR_12 Location: 7457-7604 bp Feature: domain Description: TPR_12 Location: 7457-7604 bp Feature: domain Description: TPR_12 Location: 7661-7862 bp Feature: domain Description: TPR_12 Location: 7661-7862 bp Feature: domain Description: TPR_12 Location: 8012-8225 bp Feature: domain Description: TPR_12 Location: 8012 -82 2 5 bp Feature: domain Description: COG4585 Location: 8444-9167 bp Feature: domain Description: COG4585 Location: 8444-9167 bp Feature: gene Location: 9258-9887 bp Feature: domain Description: NrdG Location: 9303-9882 bp Feature: domain Description: NrdG Location: 9303-9882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, TPR_12 (pfam13424), COG4585 (Signal transduction histidine kinase ), NrdG (TIGR02491)