myRT

myRT report for GCA_900112775.1_IMG-taxon_2599185221_annotated_assembly

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Seq: FOYZ01000002.1 (435668 bp)
Overview 1 RT 1: 263492-266685 bp 2 RT 2: 389735-395543 bp Neighborhood of RT #1 [263492, 266685] MqsA RVT-GII GIIM StbD Neighborhood of RT #2 [389735, 395569] COG2316 Acetyltransf_9 RVT-UG12 ALDH_YwdH-P39616 SigM_subfam Feature: gene Location: 263492-263722 bp Feature: domain Description: MqsA Location: 263498-263684 bp Feature: domain Description: MqsA Location: 263498-263684 bp Feature: gene Location: 264171-264356 bp Feature: gene Location: 264463-265767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264664-265282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264664-265282 bp Feature: domain Description: GIIM Note: maturase Location: 265345-265546 bp Feature: domain Description: GIIM Note: maturase Location: 265345-265546 bp Feature: gene Location: 265932-266198 bp Feature: domain Description: StbD Location: 265935-266157 bp Feature: domain Description: StbD Location: 265935-2661 57 bp Feature: gene Location: 266509-266685 bp Feature: gene Location: 389735-390280 bp Feature: domain Description: COG2316 Location: 389738-390269 bp Feature: domain Description: COG231 6 Location: 389738-390269 bp Feature: gene Location: 390298-391209 bp Feature: domain Description: Acetyltransf_9 Location: 390352-390688 bp Feature: domain Description: Acetyltransf_9 Location: 390352-390688 bp Feature: gene Location: 391302-393035 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 391833-392259 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 391 833-392259 bp Feature: gene Location: 393137-394522 bp Feature: domain Description: ALDH_YwdH-P39616 Location: 393164-394502 bp Feature: domain Description: ALDH_YwdH-P3961 6 Location: 3931 64-394502 bp Feature: gene Location: 395054-395569 bp Feature: domain Description: SigM_subfam Location: 395081-395543 bp Feature: domain Description: SigM_subfam Location: 395081 -395543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MqsA (cl15819), RVT-GII, GIIM (pfam08388), StbD (COG2161), COG2316 (Predicted hydrolase, HD superfamily ), Acetyltransf_9 (pfam13527), RVT-UG12, ALDH_YwdH-P39616 (cd07136), SigM_subfam (TIGR02950)

Seq: FOYZ01000031.1 (10838 bp)
Overview 1 RT 1: 517-2414 bp Neighborhood of RT #1 [517, 2503] RVT-GII GIIM HTH_3 Feature: gene Location: 517-1815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817-1456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817-1456 bp Feature: domain Description: GIIM Note: maturase Location: 1534-1750 bp Feature: domain Description: GIIM Note: maturase Location: 1534-1750 bp Feature: gene Location: 1911-2039 bp Feature: gene Location: 2288-2503 bp Feature: domain Description: HTH_3 Location: 2318-2414 bp Feature: domain Description: HTH_3 Location: 2 318-2 414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_3 (pfam01381)

Seq: FOYZ01000007.1 (219718 bp)
Overview 1 RT 1: 65096-71267 bp Neighborhood of RT #1 [65096, 71281] Trep_Strep AraC RVT-UG5 nitrilase DUF45 COG3943 Feature: gene Location: 65096-65707 bp Feature: domain Description: Trep_Strep Location: 65138-65690 bp Feature: domain Description: Trep_Strep Location: 6513 8-65690 bp Feature: gene Location: 65921-66901 bp Feature: domain Description: AraC Location: 66572-66881 bp Feature: domain Description: AraC Location: 66572-66881 bp Feature: gene Location: 66957-69917 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67443-67956 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 67443 -67956 bp Feature: domain Description: nitrilase Location: 69126-69771 bp Feature: domain Description: nitrilase Location: 69126-69771 bp Feature: gene Location: 69929-70075 bp Feature: domain Description: DUF45 Location: 69935-70052 bp Feature: domain Description: DUF45 Location: 6993 5-70052 bp Feature: gene Location: 70130-71281 bp Feature: domain Description: COG3943 Location: 70292-71267 bp Feature: domain Description: COG3 943 Location: 70292-71267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trep_Strep (TIGR02185), AraC (COG2207), RVT-UG5, nitrilase (cl11424), DUF45 (pfam01863), COG3943 (Uncharacterized conserved protein )