myRT

myRT report for GCA_900112885.1_IMG-taxon_2593339256_annotated_assembly

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Seq: FOZC01000009.1 (147818 bp)
Overview 1 RT 1: 51632-55337 bp Neighborhood of RT #1 [51632, 55450] trpA RVT-GII GIIM Cytidylate_kin2 Feature: gene Location: 51632-52426 bp Feature: domain Description: trpA Location: 51680-52421 bp Feature: domain Description: trpA Location: 51 680-52421 bp Feature: gene Location: 52524-52670 bp Feature: gene Location: 52942-54339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53263-53887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53263-53887 bp Feature: domain Description: GIIM Note: maturase Location: 53941-54160 bp Feature: domain Description: GIIM Note: maturase Location: 53941 -541 60 bp Feature: gene Location: 54463-54663 bp Feature: gene Location: 54770-55450 bp Feature: domain Description: Cytidylate_kin2 Location: 54791-55337 bp Feature: domain Description: Cytidylate_kin2 Location: 54791 -55337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trpA (TIGR00262), RVT-GII, GIIM (pfam08388), Cytidylate_kin2 (pfam13189)

Seq: FOZC01000030.1 (1942 bp)
Overview 1 RT 1: 73-1679 bp Neighborhood of RT #1 [73, 1679] RVT-GII GIIM Feature: gene Location: 73-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-1015 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1285 bp Feature: domain Description: GIIM Note: maturase Location: 1072 -12 85 bp Feature: gene Location: 1527-1679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FOZC01000013.1 (101500 bp)
Overview 1 RT 1: 51316-58572 bp Neighborhood of RT #1 [51316, 58577] acetolactate_decarboxylase cNMP_binding RVT-UG26 NHLM_micro_ABC1 NHLM_micro_ABC2 Feature: gene Location: 51316-52101 bp Feature: domain Description: acetolactate_decarboxylase Location: 51391-52090 bp Feature: domain Description: acetolactate_decarboxylase Location: 513 91-52090 bp Feature: gene Location: 52205-52720 bp Feature: domain Description: cNMP_binding Location: 52238-52490 bp Feature: domain Description: cNMP_binding Location: 5223 8-52490 bp Feature: gene Location: 52732-53949 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 52957-53566 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 52957-53 566 bp Feature: gene Location: 54281-56401 bp Feature: domain Description: NHLM_micro_ABC1 Location: 54287-56396 bp Feature: domain Description: NHLM_micro_ABC1 Location: 54287-563 96 bp Feature: gene Location: 56412-58577 bp Feature: domain Description: NHLM_micro_ABC2 Location: 56688-58572 bp Feature: domain Description: NHLM_micro_ABC2 Location: 56688-58572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT acetolactate_decarboxylase (cd17299), cNMP_binding (pfam00027), RVT-UG26, NHLM_micro_ABC1 (TIGR03796), NHLM_micro_ABC2 (TIGR03797)

Seq: FOZC01000002.1 (325365 bp)
Overview 1 RT 1: 3682-10373 bp Neighborhood of RT #1 [3682, 10393] KOG0260 RVT-GII GIIM RpoE DUF4367 Feature: gene Location: 3682-6606 bp Feature: domain Description: KOG0260 Location: 5956-6301 bp Feature: domain Description: KOG0260 Location: 5956-6301 bp Feature: gene Location: 6665-7120 bp Feature: gene Location: 7190-8587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7511-8135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7511-8135 bp Feature: domain Description: GIIM Note: maturase Location: 8189-8408 bp Feature: domain Description: GIIM Note: maturase Location: 8189-84 08 bp Feature: gene Location: 9082-9597 bp Feature: domain Description: RpoE Location: 9094-9577 bp Feature: domain Description: RpoE Location: 9094 -9577 bp Feature: gene Location: 9584-10393 bp Feature: domain Description: DUF4367 Location: 10067-10373 bp Feature: domain Description: DUF4 367 Location: 10067-10373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0260 (KOG0260, RNA polymerase II, large subunit ), RVT-GII, GIIM (pfam08388), RpoE (COG3343), DUF4367 (pfam14285)