myRT

myRT report for GCA_900112965.1_IMG-taxon_2616644814_annotated_assembly

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Seq: FONR01000064.1 (9998 bp)
Overview 1 RT 1: 1-2792 bp Neighborhood of RT #1 [1, 2824] RVT-GII GIIM COG3293 COG3293 Feature: gene Location: 1-897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-51 1 bp Feature: domain Description: GIIM Note: maturase Location: 589-817 bp Feature: domain Description: GIIM Note: maturase Location: 589-81 7 bp Feature: gene Location: 1029-1163 bp Feature: gene Location: 1907-2824 bp Feature: domain Description: COG3293 Location: 2021-2363 bp Feature: domain Description: COG3293 Location: 2021 -2363 bp Feature: domain Description: COG3293 Location: 2414-2792 bp Feature: domain Description: COG3293 Location: 241 4-2792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FONR01000061.1 (12580 bp)
Overview 1 RT 1: 8368-12565 bp Neighborhood of RT #1 [8368, 12579] ALDH_F21_RNP123 DEDD_Tnp_IS110 Transposase_20 RVT-GII Feature: gene Location: 8368-9813 bp Feature: domain Description: ALDH_F21_RNP123 Location: 8431-9796 bp Feature: domain Description: ALDH_F2 1_RNP12 3 Location: 8431-9796 bp Feature: gene Location: 10234-11118 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 10240-10375 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 102 40-10375 bp Feature: domain Description: Transposase_20 Location: 10714-10969 bp Feature: domain Description: Transposase_2 0 Location: 10714-10969 bp Feature: gene Location: 11710-12579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11971-12565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11971-12 565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FONR01000074.1 (2433 bp)
Overview 1 RT 1: 543-2283 bp Neighborhood of RT #1 [543, 2327] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 543-2327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1605 bp Feature: domain Description: Intron_maturas2 Location: 1707-1941 bp Feature: domain Description: Intron_maturas2 Location: 1707-1941 bp Feature: domain Description: HNHc Note: nucleases Location: 2103-2283 bp Feature: domain Description: HNHc Note: nucleases Location: 2103 -2283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FONR01000034.1 (98097 bp)
Overview 1 RT 1: 94043-97836 bp Neighborhood of RT #1 [94043, 97880] GlxA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 94043-94336 bp Feature: gene Location: 94768-95856 bp Feature: domain Description: GlxA Location: 94801-95740 bp Feature: domain Description: GlxA Location: 94 801-9574 0 bp Feature: gene Location: 96099-97880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96360-97155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96360-97155 bp Feature: domain Description: Intron_maturas2 Location: 97269-97479 bp Feature: domain Description: Intron_maturas2 Location: 97269-974 79 bp Feature: domain Description: HNHc Note: nucleases Location: 97677-97836 bp Feature: domain Description: HNHc Note: nucleases Location: 97677-97836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FONR01000014.1 (314422 bp)
Overview 1 RT 1: 110786-117504 bp Neighborhood of RT #1 [110786, 117536] Abhydrolase_6 DEDD_Tnp_IS110 Transposase_20 RVT-GII GIIM InsQ PRK12863 PRK12863 Feature: gene Location: 110786-111481 bp Feature: domain Description: Abhydrolase_6 Location: 110795-111464 bp Feature: domain Description: Abhydrolase_6 Location: 110795 -111464 bp Feature: gene Location: 111779-112663 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 111785-111920 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 111785 -111920 bp Feature: domain Description: Transposase_20 Location: 112262-112514 bp Feature: domain Description: Transposase_20 Location: 112262-1125 14 bp Feature: gene Location: 113300-114562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113516-114176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1135 16-114176 bp Feature: domain Description: GIIM Note: maturase Location: 114254-114482 bp Feature: domain Description: GIIM Note: maturase Location: 11425 4-114482 bp Feature: gene Location: 115333-116832 bp Feature: domain Description: InsQ Location: 116092-116716 bp Feature: domain Description: InsQ Location: 116092-116716 bp Feature: gene Location: 116988-117536 bp Feature: domain Description: PRK12863 Location: 116991-117264 bp Feature: domain Description: PRK12863 Location: 116991-117264 bp Feature: domain Description: PRK12863 Location: 117369-117504 bp Feature: domain Description: PRK12863 Location: 117369-1175 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FONR01000038.1 (69435 bp)
Overview 1 RT 1: 16657-25033 bp 2 RT 2: 61927-68139 bp Neighborhood of RT #1 [16657, 25033] HTH_XRE KOG0263 WD40 WD40 RVT-GII Intron_maturas2 DDE_Tnp_1_2 Neighborhood of RT #2 [61927, 69269] HTH_XRE KOG0263 WD40 WD40 RVT-GII Intron_maturas2 Feature: gene Location: 16657-20544 bp Feature: domain Description: HTH_XRE Location: 16768-16933 bp Feature: domain Description: HTH_XRE Location: 16 76 8-16 933 bp Feature: domain Description: KOG0263 Location: 18514-18682 bp Feature: domain Description: KOG026 3 Location: 18514-186 82 bp Feature: domain Description: WD40 Location: 18823-19363 bp Feature: domain Description: WD40 Location: 18823-1936 3 bp Feature: domain Description: WD40 Location: 19711-20407 bp Feature: domain Description: WD40 Location: 19711-20407 bp Feature: gene Location: 20604-21029 bp Feature: gene Location: 21483-23999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21744-22539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21744-22539 bp Feature: domain Description: Intron_maturas2 Location: 22656-22869 bp Feature: domain Description: Intron_maturas2 Location: 226 56 -2286 9 bp Feature: gene Location: 24459-24674 bp Feature: domain Description: DDE_Tnp_1_2 Location: 24465-24615 bp Feature: domain Description: DDE_Tnp_1_2 Location: 2446 5-246 15 bp Feature: gene Location: 24776-25033 bp Feature: gene Location: 61927-65814 bp Feature: domain Description: HTH_XRE Location: 62038-62203 bp Feature: domain Description: HTH_XRE Location: 6 2038-6 2203 bp Feature: domain Description: KOG0263 Location: 63784-63952 bp Feature: domain Description: KOG026 3 Location: 6 3784-6 3952 bp Feature: domain Description: WD40 Location: 64093-64633 bp Feature: domain Description: WD40 Location: 6 4093-6 46 33 bp Feature: domain Description: WD40 Location: 64981-65677 bp Feature: domain Description: WD40 Location: 6 4981-6 56 77 bp Feature: gene Location: 65874-66299 bp Feature: gene Location: 66753-69269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67014-67809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 7014-6 7809 bp Feature: domain Description: Intron_maturas2 Location: 67926-68139 bp Feature: domain Description: Intron_maturas2 Location: 6 7926 -6 8139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT