myRT

myRT report for GCA_900112985.1_IMG-taxon_2597490344_annotated_assembly

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Seq: FONS01000004.1 Pedobacter antarcticus strain ATCC 51969 genome assembly, contig: Ga0052889_scaffold00004.4, whole genome shotgun sequence (384477 bp)
Overview 1 RT 1: 380260-383787 bp Neighborhood of RT #1 [380260, 384002] group_II_RT_mat RVT-GII GIIM AAA_21 Feature: gene Location: 380260-380466 bp Feature: gene Location: 380544-380816 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 380610-380805 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 38061 0-380805 bp Feature: gene Location: 380830-381843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380833-381394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380833-381 394 bp Feature: domain Description: GIIM Note: maturase Location: 381451-381667 bp Feature: domain Description: GIIM Note: maturase Location: 381 451 -381 667 bp Feature: gene Location: 382082-382534 bp Feature: gene Location: 382527-384002 bp Feature: domain Description: AAA_21 Location: 382788-383787 bp Feature: domain Description: AAA_21 Location: 382788-383787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), AAA_21 (pfam13304)

Seq: FONS01000014.1 Pedobacter antarcticus strain ATCC 51969 genome assembly, contig: Ga0052889_scaffold00014.14, whole genome shotgun sequence (101828 bp)
Overview 1 RT 1: 34708-40835 bp Neighborhood of RT #1 [34708, 40835] COG4849 VirE_N PriCT_2 RVT-UG28b Mrr_cat Feature: gene Location: 34708-35484 bp Feature: domain Description: COG4849 Location: 34789-35443 bp Feature: domain Description: COG4849 Location: 34789-35443 bp Feature: gene Location: 35536-36564 bp Feature: domain Description: VirE_N Location: 35719-36094 bp Feature: domain Description: VirE_N Location: 35719-36094 bp Feature: domain Description: PriCT_2 Location: 36280-36508 bp Feature: domain Description: PriCT_2 Location: 362 80-36508 bp Feature: gene Location: 36673-38427 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 37117-37846 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 37117-37846 bp Feature: gene Location: 38441-39910 bp Feature: domain Description: Mrr_cat Location: 38492-38750 bp Feature: domain Description: Mrr_cat Location: 38492 -38750 bp Feature: gene Location: 40317-40835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4849 (Predicted nucleotidyltransferase ), VirE_N (pfam08800), PriCT_2 (pfam08707), RVT-UG28b, Mrr_cat (pfam04471)