myRT

myRT report for GCA_900113595.1_IMG-taxon_2657245270_annotated_assembly

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Seq: FOPX01000003.1 (827517 bp)
Overview 1 RT 1: 93-4854 bp 2 RT 2: 824222-827265 bp Neighborhood of RT #1 [93, 4859] RVT-GII GIIM COG3459 Neighborhood of RT #2 [824222, 827444] GH25_LytC-like COG5263 RVT-GII GIIM Feature: gene Location: 93-224 bp Feature: gene Location: 457-1848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1 399 bp Feature: domain Description: GIIM Note: maturase Location: 1453-1669 bp Feature: domain Description: GIIM Note: maturase Location: 1 453-1 669 bp Feature: gene Location: 2318-2485 bp Feature: gene Location: 2466-4859 bp Feature: domain Description: COG3459 Location: 2469-4854 bp Feature: domain Description: COG3459 Location: 2469-4854 bp Feature: gene Location: 824222-825484 bp Feature: domain Description: GH25_LytC-like Location: 824330-824867 bp Feature: domain Description: GH25_LytC-like Location: 824330-824867 bp Feature: domain Description: COG5263 Location: 824906-825305 bp Feature: domain Description: COG5263 Location: 824906-825305 bp Feature: gene Location: 825689-825820 bp Feature: gene Location: 826053-827444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826368-826995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826368-826995 bp Feature: domain Description: GIIM Note: maturase Location: 827049-827265 bp Feature: domain Description: GIIM Note: maturase Location: 827049-827265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3459 (Cellobiose phosphorylase ), GH25_LytC-like (cd06414), COG5263 (Glucan-binding domain (YG repeat) )

Seq: FOPX01000007.1 (398509 bp)
Overview 1 RT 1: 394329-398417 bp Neighborhood of RT #1 [394329, 398417] MPP_YkuE_C DacC RVT-GII GIIM Feature: gene Location: 394329-395210 bp Feature: domain Description: MPP_YkuE_C Location: 394464-395190 bp Feature: domain Description: MPP_YkuE_C Location: 394464-395190 bp Feature: gene Location: 395268-396458 bp Feature: domain Description: DacC Location: 395295-396414 bp Feature: domain Description: DacC Location: 3952 95-396414 bp Feature: gene Location: 396662-398053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396977-397604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396977-397604 bp Feature: domain Description: GIIM Note: maturase Location: 397658-397874 bp Feature: domain Description: GIIM Note: maturase Location: 397658-397874 bp Feature: gene Location: 398286-398417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_YkuE_C (cd07385), DacC (COG1686), RVT-GII, GIIM (pfam08388)

Seq: FOPX01000009.1 (370928 bp)
Overview 1 RT 1: 209398-211893 bp Neighborhood of RT #1 [209398, 211928] RVT-Retrons tRNA_anti_2 Feature: gene Location: 209398-209679 bp Feature: gene Location: 209771-210004 bp Feature: gene Location: 210022-210915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210100-210655 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210100-210655 bp Feature: gene Location: 210950-211249 bp Feature: gene Location: 211350-211928 bp Feature: domain Description: tRNA_anti_2 Location: 211647-211893 bp Feature: domain Description: tRNA_anti_2 Location: 211647-211893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, tRNA_anti_2 (pfam13742)

Seq: FOPX01000005.1 (695262 bp)
Overview 1 RT 1: 89990-96803 bp Neighborhood of RT #1 [89990, 96994] SPOUT_MTase RVT-UG5 nitrilase MFS_NIMT_CynX_like SWIM Feature: gene Location: 89990-90883 bp Feature: gene Location: 90907-91485 bp Feature: domain Description: SPOUT_MTase Location: 91009-91480 bp Feature: domain Description: SPOUT_MTase Location: 91009-914 80 bp Feature: gene Location: 91749-94715 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 92235-92721 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 92235-92721 bp Feature: domain Description: nitrilase Location: 93912-94563 bp Feature: domain Description: nitrilase Location: 93912-94 563 bp Feature: gene Location: 95042-96211 bp Feature: domain Description: MFS_NIMT_CynX_like Location: 95072-96194 bp Feature: domain Description: MFS_NIMT_CynX_like Location: 95072-96194 bp Feature: gene Location: 96560-96994 bp Feature: domain Description: SWIM Location: 96701-96803 bp Feature: domain Description: SWIM Location: 96701-96803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SPOUT_MTase (pfam02590), RVT-UG5, nitrilase (cl11424), MFS_NIMT_CynX_like (cd17339), SWIM (pfam04434)