myRT

myRT report for GCA_900113645.1_IMG-taxon_2619618836_annotated_assembly

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Seq: FOQC01000015.1 (47460 bp)
Overview 1 RT 1: 28698-34203 bp Neighborhood of RT #1 [28698, 34244] YedY DUF3159 RVT-GII GIIM PRK13353 Feature: gene Location: 28698-29399 bp Feature: domain Description: YedY Location: 28923-29391 bp Feature: domain Description: YedY Location: 28923-29391 bp Feature: gene Location: 29430-30188 bp Feature: domain Description: DUF3159 Location: 29580-30090 bp Feature: domain Description: DUF31 59 Location: 29580-30090 bp Feature: gene Location: 30903-32210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31212-31845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 21 2-31 845 bp Feature: domain Description: GIIM Note: maturase Location: 31926-32157 bp Feature: domain Description: GIIM Note: maturase Location: 31 926-321 57 bp Feature: gene Location: 32418-32627 bp Feature: gene Location: 32784-34244 bp Feature: domain Description: PRK13353 Location: 32829-34203 bp Feature: domain Description: PRK1 3353 Location: 32829-34203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YedY (COG2041), DUF3159 (pfam11361), RVT-GII, GIIM (pfam08388), PRK13353 (aspartate ammonia-lyase; Provisional)

Seq: FOQC01000008.1 (81481 bp)
Overview 1 RT 1: 41856-46149 bp Neighborhood of RT #1 [41856, 46439] McrBC RVT-UG2 NTP-PPase_RS21-C6_like LysR Feature: gene Location: 41856-43160 bp Feature: domain Description: McrBC Location: 42045-43011 bp Feature: domain Description: McrBC Location: 42 045-43011 bp Feature: gene Location: 43369-43584 bp Feature: gene Location: 43706-45052 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 43904-44732 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 43904-44732 bp Feature: gene Location: 45132-45467 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 45156-45408 bp Feature: domain Description: NTP-PPase_RS2 1-C6_like Location: 45156-45408 bp Feature: gene Location: 45540-46439 bp Feature: domain Description: LysR Location: 45552-46149 bp Feature: domain Description: LysR Location: 45552 -46149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrBC (pfam10117), RVT-UG2, NTP-PPase_RS21-C6_like (cd11537), LysR (COG0583)

Seq: FOQC01000009.1 (73515 bp)
Overview 1 RT 1: 32164-38379 bp Neighborhood of RT #1 [32164, 38379] PedC_BrcD rpmE2 RVT-GII RVT-GII GIIM DUF1801 OmdA Feature: gene Location: 32164-32535 bp Feature: domain Description: PedC_BrcD Location: 32188-32518 bp Feature: domain Description: PedC_BrcD Location: 3 2188-3 2518 bp Feature: gene Location: 32751-33014 bp Feature: domain Description: rpmE2 Location: 32754-33006 bp Feature: domain Description: rpmE2 Location: 3 2754-3 3 006 bp Feature: gene Location: 33449-34477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33788-34406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 788-3 4406 bp Feature: gene Location: 34579-34854 bp Feature: gene Location: 35341-36642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35608-36265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5608-3 6265 bp Feature: domain Description: GIIM Note: maturase Location: 36346-36565 bp Feature: domain Description: GIIM Note: maturase Location: 3 63 46-3 6565 bp Feature: gene Location: 37036-38169 bp Feature: domain Description: DUF1801 Location: 37114-37423 bp Feature: domain Description: DUF1801 Location: 3 7114-3 7423 bp Feature: domain Description: OmdA Location: 37957-38122 bp Feature: domain Description: OmdA Location: 3 7957-3 8122 bp Feature: gene Location: 38248-38379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PedC_BrcD (TIGR01295), rpmE2 (PRK01678), RVT-GII, GIIM (pfam08388), DUF1801 (pfam08818), OmdA (pfam13376)