myRT

myRT report for GCA_900113735.1_IMG-taxon_2651870130_annotated_assembly

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Seq: FOQM01000066.1 (22969 bp)
Overview 1 RT 1: 282-4534 bp Neighborhood of RT #1 [282, 4534] Transposase_mut RVT-GII RVT-GII Feature: gene Location: 282-1229 bp Feature: domain Description: Transposase_mut Location: 291-1134 bp Feature: domain Description: Transposase_mut Location: 291 -1 1 34 bp Feature: gene Location: 1583-1780 bp Feature: gene Location: 1804-2460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2131-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 31 -241 9 bp Feature: gene Location: 2599-3180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2605-2815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2605-281 5 bp Feature: gene Location: 3991-4194 bp Feature: gene Location: 4364-4534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII

Seq: FOQM01000023.1 (127900 bp)
Overview 1 RT 1: 271-6473 bp Neighborhood of RT #1 [271, 6473] ParB_N_like ArdC RVT-GII RVT-GII KOG4768 Feature: gene Location: 271-2112 bp Feature: domain Description: ParB_N_like Location: 313-559 bp Feature: domain Description: ParB_N_like Location: 313-559 bp Feature: gene Location: 2270-3232 bp Feature: domain Description: ArdC Location: 2300-3209 bp Feature: domain Description: ArdC Location: 2 300-32 09 bp Feature: gene Location: 4484-4681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4487-4634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4487-4634 bp Feature: gene Location: 4874-5308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5060-5171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5060-5171 bp Feature: gene Location: 5238-5924 bp Feature: domain Description: KOG4768 Location: 5274-5886 bp Feature: domain Description: KOG4768 Location: 52 74-5886 bp Feature: gene Location: 6279-6473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), ArdC (COG4227), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: FOQM01000083.1 (5705 bp)
Overview 1 RT 1: 2627-5673 bp Neighborhood of RT #1 [2627, 5702] TnpB_IS66 HTH_Tnp_1 RVT-GII GIIM RVT-GII COG3415 Feature: gene Location: 2627-2980 bp Feature: domain Description: TnpB_IS66 Location: 2654-2942 bp Feature: domain Description: TnpB_IS66 Location: 2654-2942 bp Feature: gene Location: 2977-3438 bp Feature: domain Description: HTH_Tnp_1 Location: 3055-3196 bp Feature: domain Description: HTH_Tnp_1 Location: 3 055-3 196 bp Feature: gene Location: 3565-4179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3571-3790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 571-3 790 bp Feature: domain Description: GIIM Note: maturase Location: 3871-4084 bp Feature: domain Description: GIIM Note: maturase Location: 3 871-4084 bp Feature: gene Location: 4187-4825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4403-4820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4403 -4820 bp Feature: gene Location: 5433-5702 bp Feature: domain Description: COG3415 Location: 5436-5673 bp Feature: domain Description: COG3 415 Location: 543 6-5673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), COG3415 (Transposase )

Seq: FOQM01000052.1 (46893 bp)
Overview 1 RT 1: 23622-28839 bp Neighborhood of RT #1 [23622, 28925] RVT-GII Transposase_mut Feature: gene Location: 23622-24104 bp Feature: gene Location: 24405-24770 bp Feature: gene Location: 25780-27150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26104-26785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26104 -26785 bp Feature: gene Location: 27310-27570 bp Feature: gene Location: 27726-28925 bp Feature: domain Description: Transposase_mut Location: 27738-28839 bp Feature: domain Description: Transposase_mut Location: 27738-28839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_mut (pfam00872)

Seq: FOQM01000016.1 (163194 bp)
Overview 1 RT 1: 32344-39773 bp Neighborhood of RT #1 [32344, 39787] nitrilase group_II_RT_mat RVT-UG6 Toprim_2 PRK09182 Feature: gene Location: 32344-33153 bp Feature: gene Location: 33840-34646 bp Feature: domain Description: nitrilase Location: 33873-34464 bp Feature: domain Description: nitrilase Location: 33873-34464 bp Feature: gene Location: 34727-37897 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 34763-35099 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 34763-35 099 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 35351-35780 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 35 35 1-35 780 bp Feature: gene Location: 37894-38235 bp Feature: domain Description: Toprim_2 Location: 37963-38215 bp Feature: domain Description: Toprim_2 Location: 37963-38215 bp Feature: gene Location: 38900-39787 bp Feature: domain Description: PRK09182 Location: 38918-39773 bp Feature: domain Description: PRK09182 Location: 38918-39773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase (cl11424), group_II_RT_mat (TIGR04416), RVT-UG6, Toprim_2 (pfam13155), PRK09182 (DNA polymerase III subunit epsilon; Validated)