myRT

myRT report for GCA_900114055.1_IMG-taxon_2675903228_annotated_assembly

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Seq: FORR01000002.1 (406181 bp)
Overview 1 RT 1: 169760-177123 bp Neighborhood of RT #1 [169760, 177123] ANAPC4_WD40 ANAPC4_WD40 UvrD UvrD RVT-UG12 STKc_PknB_like Feature: gene Location: 169760-171130 bp Feature: domain Description: ANAPC4_WD40 Location: 170534-170630 bp Feature: domain Description: ANAPC4_WD40 Location: 1 70534-1 70630 bp Feature: domain Description: ANAPC4_WD40 Location: 170909-171038 bp Feature: domain Description: ANAPC4_WD40 Location: 1 70909-1 71 038 bp Feature: gene Location: 171274-173403 bp Feature: domain Description: UvrD Location: 172018-173134 bp Feature: domain Description: UvrD Location: 1 7201 8-1 731 34 bp Feature: domain Description: UvrD Location: 173158-173365 bp Feature: domain Description: UvrD Location: 1 731 58-1 73365 bp Feature: gene Location: 173484-175040 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 173850-174300 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 73850-1 74300 bp Feature: gene Location: 175310-176473 bp Feature: domain Description: STKc_PknB_like Location: 175346-176120 bp Feature: domain Description: STKc_PknB_like Location: 1 75346-1 761 20 bp Feature: gene Location: 176965-177123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANAPC4_WD40 (pfam12894), UvrD (COG0210), RVT-UG12, STKc_PknB_like (cd14014)

Seq: FORR01000068.1 (1264 bp)
Overview 1 RT 1: 132-1197 bp Neighborhood of RT #1 [132, 1262] RVT-GII GIIM Feature: gene Location: 132-1262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 64-894 bp Feature: domain Description: GIIM Note: maturase Location: 975-1197 bp Feature: domain Description: GIIM Note: maturase Location: 975-1197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FORR01000001.1 (521220 bp)
Overview 1 RT 1: 421314-425198 bp Neighborhood of RT #1 [421314, 425198] nucleoid_noc BcsQ RVT-UNC KOG4768 Feature: gene Location: 421314-422177 bp Feature: domain Description: nucleoid_noc Location: 421389-422052 bp Feature: domain Description: nucleoid_noc Location: 4213 89-422052 bp Feature: gene Location: 422167-422958 bp Feature: domain Description: BcsQ Location: 422242-422944 bp Feature: domain Description: BcsQ Location: 422242-422944 bp Feature: gene Location: 423010-424257 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 423250-423823 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 423 250-423 823 bp Feature: domain Description: KOG4768 Location: 423904-424135 bp Feature: domain Description: KOG4768 Location: 423 904-42413 5 bp Feature: gene Location: 424172-424504 bp Feature: gene Location: 424992-425198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nucleoid_noc (TIGR04285), BcsQ (COG1192), RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC), KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: FORR01000019.1 (72229 bp)
Overview 1 RT 1: 48566-58081 bp Neighborhood of RT #1 [48566, 58081] YqiK RVT-Retrons Feature: gene Location: 48566-50071 bp Feature: domain Description: YqiK Location: 48599-50018 bp Feature: domain Description: YqiK Location: 4 8599-50018 bp Feature: gene Location: 50294-51841 bp Feature: gene Location: 52157-53602 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52721-53342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52721-5334 2 bp Feature: gene Location: 53624-55270 bp Feature: gene Location: 55271-58081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqiK (COG2268), RVT-Retrons