myRT

myRT report for GCA_900114995.1_IMG-taxon_2693429788_annotated_assembly

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Seq: FOUX01000001.1 (2341410 bp)
Overview 1 RT 1: 1816347-1824076 bp Neighborhood of RT #1 [1816347, 1825035] CypX RVT-Retrons SWIM WGR_DNA_ligase HEAT_2 HEAT_2 Feature: gene Location: 1816347-1817465 bp Feature: domain Description: CypX Location: 1816377-1817454 bp Feature: domain Description: CypX Location: 1 81 6377-1 81 7454 bp Feature: gene Location: 1817706-1818092 bp Feature: gene Location: 1818189-1819700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1818732-1819350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 81 8732-1 81 9350 bp Feature: gene Location: 1820148-1821806 bp Feature: domain Description: SWIM Location: 1821672-1821765 bp Feature: domain Description: SWIM Location: 1 821 672-1 821 765 bp Feature: gene Location: 1821817-1825035 bp Feature: domain Description: WGR_DNA_ligase Location: 1821832-1822057 bp Feature: domain Description: WGR_DNA_ligase Location: 1 821 832-1 822057 bp Feature: domain Description: HEAT_2 Location: 1822195-1822402 bp Feature: domain Description: HEAT_2 Location: 1 8221 95-1 822402 bp Feature: domain Description: HEAT_2 Location: 1823848-1824076 bp Feature: domain Description: HEAT_2 Location: 1 823848-1 824076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CypX (COG2124), RVT-Retrons, SWIM (pfam04434), WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)

Seq: FOUX01000006.1 (817904 bp)
Overview 1 RT 1: 648252-652723 bp Neighborhood of RT #1 [648252, 654642] RVT-GII RVT-GII GIIM AAA_14 Feature: gene Location: 648252-648794 bp Feature: gene Location: 648990-649181 bp Feature: gene Location: 649505-650230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649769-650174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649769-650174 bp Feature: gene Location: 650245-650805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 650248-650437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6502 48-650437 bp Feature: domain Description: GIIM Note: maturase Location: 650512-650722 bp Feature: domain Description: GIIM Note: maturase Location: 650512 -65072 2 bp Feature: gene Location: 650974-651144 bp Feature: gene Location: 651781-654642 bp Feature: domain Description: AAA_14 Location: 652432-652723 bp Feature: domain Description: AAA_14 Location: 652 432 -652 72 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AAA_14 (pfam13173)