myRT

myRT report for GCA_900115115.1_IMG-taxon_2675903027_annotated_assembly

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Seq: FOVI01000005.1 (196089 bp)
Overview 1 RT 1: 75499-81430 bp Neighborhood of RT #1 [75499, 81477] DUF4141 Bac_Flav_CT_G RVT-GII group_II_RT_mat HNHc Bac_Flav_CT_G DUF4133 Feature: gene Location: 75499-76131 bp Feature: domain Description: DUF4141 Location: 75517-75670 bp Feature: domain Description: DUF41 41 Location: 7551 7-75670 bp Feature: gene Location: 76160-76609 bp Feature: domain Description: Bac_Flav_CT_G Location: 76172-76586 bp Feature: domain Description: Bac_Flav_CT_G Location: 761 72-76586 bp Feature: gene Location: 76705-78516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76969-77791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76969-77791 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 78001-78121 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 78001 -781 21 bp Feature: domain Description: HNHc Note: nucleases Location: 78337-78490 bp Feature: domain Description: HNHc Note: nucleases Location: 78337-78490 bp Feature: gene Location: 79061-81151 bp Feature: domain Description: Bac_Flav_CT_G Location: 79064-81140 bp Feature: domain Description: Bac_Flav_CT_G Location: 79064-81 1 40 bp Feature: gene Location: 81148-81477 bp Feature: domain Description: DUF4133 Location: 81163-81430 bp Feature: domain Description: DUF41 33 Location: 81 1 63-81 430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), DUF4133 (pfam13571)

Seq: FOVI01000029.1 (35090 bp)
Overview 1 RT 1: 10665-18312 bp Neighborhood of RT #1 [10665, 18374] RMtype1_S_LdeBORF1052P-TRD2-CR2 RMtype1_S_LdeBORF1052P-TRD2-CR2 mtlR RVT-UG2 HTH_ARAC Tas Feature: gene Location: 10665-12770 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 10785-11292 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 10785-112 92 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 11577-12138 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 11577-12 138 bp Feature: gene Location: 12772-13320 bp Feature: domain Description: mtlR Location: 12976-13183 bp Feature: domain Description: mtlR Location: 12 976-13183 bp Feature: gene Location: 13759-15300 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14014-14959 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14014-14959 bp Feature: gene Location: 16149-17045 bp Feature: domain Description: HTH_ARAC Location: 16785-17031 bp Feature: domain Description: HTH_ARAC Location: 16785-17031 bp Feature: gene Location: 17367-18374 bp Feature: domain Description: Tas Location: 17382-18312 bp Feature: domain Description: Tas Location: 17382 -18312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_LdeBORF1052P-TRD2-CR2 (cd17278), mtlR (PRK11001), RVT-UG2, HTH_ARAC (smart00342), Tas (COG0667)

Seq: FOVI01000002.1 (268704 bp)
Overview 1 RT 1: 129433-134181 bp Neighborhood of RT #1 [129433, 134181] LPLAT_AGPAT-like YkuD_2 RVT-UG14 Feature: gene Location: 129433-130203 bp Feature: domain Description: LPLAT_AGPAT-like Location: 129613-130150 bp Feature: domain Description: LPLAT_AGPAT-like Location: 129613 -13 0150 bp Feature: gene Location: 130181-130798 bp Feature: domain Description: YkuD_2 Location: 130325-130766 bp Feature: domain Description: YkuD_2 Location: 13 03 25-13 0766 bp Feature: gene Location: 130937-132481 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 131363-131852 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 13 13 63 -13 1852 bp Feature: gene Location: 132864-133667 bp Feature: gene Location: 133729-134181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPLAT_AGPAT-like (cd07989), YkuD_2 (pfam13645), RVT-UG14