myRT

myRT report for GCA_900115555.1_IMG-taxon_2671180032_annotated_assembly

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Seq: FOWX01000035.1 (52629 bp)
Overview 1 RT 1: 43684-51674 bp Neighborhood of RT #1 [43684, 51691] COG0610 DUF45 RVT-UG28 COG4913 COG4924 Feature: gene Location: 43684-46968 bp Feature: domain Description: COG0610 Location: 43711-46729 bp Feature: domain Description: COG061 0 Location: 4371 1 -46729 bp Feature: gene Location: 46982-47692 bp Feature: domain Description: DUF45 Location: 47048-47669 bp Feature: domain Description: DUF45 Location: 47048-47669 bp Feature: gene Location: 47958-49454 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 48237-48873 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 48237-48873 bp Feature: gene Location: 49509-50501 bp Feature: domain Description: COG4913 Location: 49695-50439 bp Feature: domain Description: COG491 3 Location: 49695-50439 bp Feature: gene Location: 50501-51691 bp Feature: domain Description: COG4924 Location: 50534-51674 bp Feature: domain Description: COG4924 Location: 50534-51 674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863), RVT-UG28, COG4913 (Uncharacterized protein, contains a C-terminal ATPase domain ), COG4924 (Uncharacterized protein )

Seq: FOWX01000004.1 (236393 bp)
Overview 1 RT 1: 215013-223879 bp Neighborhood of RT #1 [215013, 223908] PRK10770 LptD RVT_N RVT-GII GIIM HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 215013-216281 bp Feature: domain Description: PRK10770 Location: 215070-216273 bp Feature: domain Description: PRK10770 Location: 2 15070-2 162 73 bp Feature: gene Location: 216286-219120 bp Feature: domain Description: LptD Location: 216736-219106 bp Feature: domain Description: LptD Location: 2 16736-2 19106 bp Feature: gene Location: 219240-220937 bp Feature: domain Description: RVT_N Location: 219297-219537 bp Feature: domain Description: RVT_N Location: 2 192 97-2 19537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219585-220221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 19585-2 2 02 2 1 bp Feature: domain Description: GIIM Note: maturase Location: 220272-220506 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 02 72 -2 2 0506 bp Feature: domain Description: HNH Note: nucleases Location: 220758-220896 bp Feature: domain Description: HNH Note: nucleases Location: 2 2 0758-2 2 0896 bp Feature: gene Location: 222215-223240 bp Feature: domain Description: COG3178 Location: 222302-223220 bp Feature: domain Description: COG3178 Location: 2 2 2 302 -2 2 32 2 0 bp Feature: gene Location: 223237-223908 bp Feature: domain Description: NTP_transferase_like_1 Location: 223243-223879 bp Feature: domain Description: NTP_transferase_like_1 Location: 2 2 32 43-2 2 3879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: FOWX01000026.1 (85050 bp)
Overview 1 RT 1: 17620-24066 bp Neighborhood of RT #1 [17620, 24066] groES groEL RVT_N RVT-GII GIIM HNH Kdo Feature: gene Location: 17620-17913 bp Feature: domain Description: groES Location: 17623-17908 bp Feature: domain Description: groES Location: 17623 -17908 bp Feature: gene Location: 17974-19623 bp Feature: domain Description: groEL Location: 17980-19600 bp Feature: domain Description: groEL Location: 17980-19600 bp Feature: gene Location: 20816-22315 bp Feature: domain Description: RVT_N Location: 20819-20942 bp Feature: domain Description: RVT_N Location: 20819-20942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20996-21641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20996-21641 bp Feature: domain Description: GIIM Note: maturase Location: 21692-21926 bp Feature: domain Description: GIIM Note: maturase Location: 21692-21926 bp Feature: domain Description: HNH Note: nucleases Location: 22166-22304 bp Feature: domain Description: HNH Note: nucleases Location: 22166-223 04 bp Feature: gene Location: 23162-23839 bp Feature: domain Description: Kdo Location: 23174-23798 bp Feature: domain Description: Kdo Location: 23 174-23 798 bp Feature: gene Location: 23884-24066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Kdo (pfam06293)