myRT

myRT report for GCA_900115825.1_IMG-taxon_2622736579_annotated_assembly

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Seq: FOXW01000002.1 (322769 bp)
Overview 1 RT 1: 10351-16255 bp Neighborhood of RT #1 [10351, 16255] MPP_superfamily CNP_C_terminal AbiJ_NTD4 RVT-UG2 zinc_ribbon_2 Feature: gene Location: 10351-11730 bp Feature: domain Description: MPP_superfamily Location: 10513-11233 bp Feature: domain Description: MPP_superfamily Location: 1 051 3-1 1 233 bp Feature: domain Description: CNP_C_terminal Location: 11356-11683 bp Feature: domain Description: CNP_C_terminal Location: 1 1 356-1 1 683 bp Feature: gene Location: 12000-12809 bp Feature: domain Description: AbiJ_NTD4 Location: 12012-12429 bp Feature: domain Description: AbiJ_NTD4 Location: 1 201 2-1 2429 bp Feature: gene Location: 13286-14752 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13598-14426 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 3598-1 4426 bp Feature: gene Location: 15049-15216 bp Feature: domain Description: zinc_ribbon_2 Location: 15067-15124 bp Feature: domain Description: zinc_ribbon_2 Location: 1 5067-1 51 24 bp Feature: gene Location: 15218-16255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_superfamily (cl13995), CNP_C_terminal (pfam17839), AbiJ_NTD4 (pfam18863), RVT-UG2, zinc_ribbon_2 (pfam13240)

Seq: FOXW01000007.1 (131459 bp)
Overview 1 RT 1: 116007-120618 bp Neighborhood of RT #1 [116007, 120638] DUF262 COG3472 AraC RVT-GII RVT-GII GIIM HTH_21 PHA02517 Feature: gene Location: 116007-117764 bp Feature: domain Description: DUF262 Location: 116043-116655 bp Feature: domain Description: DUF2 62 Location: 116043-116655 bp Feature: domain Description: COG3472 Location: 117009-117744 bp Feature: domain Description: COG3472 Location: 117009-117744 bp Feature: gene Location: 117966-118364 bp Feature: domain Description: AraC Location: 118032-118341 bp Feature: domain Description: AraC Location: 118032 -118341 bp Feature: gene Location: 118777-119382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118990-119368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118990-119368 bp Feature: gene Location: 119439-120065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119442-119607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119442 -119607 bp Feature: domain Description: GIIM Note: maturase Location: 119670-119898 bp Feature: domain Description: GIIM Note: maturase Location: 119670-119898 bp Feature: gene Location: 120239-120382 bp Feature: domain Description: HTH_21 Location: 120254-120344 bp Feature: domain Description: HTH_2 1 Location: 12 02 54-12 0344 bp Feature: gene Location: 120414-120638 bp Feature: domain Description: PHA02517 Location: 120462-120618 bp Feature: domain Description: PHA02 517 Location: 12 0462 -12 0618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), COG3472 (Uncharacterized protein ), AraC (COG2207), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), PHA02517 (putative transposase OrfB; Reviewed)