myRT

myRT report for GCA_900116605.1_IMG-taxon_2663763603_annotated_assembly

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Seq: FPBC01000014.1 (120259 bp)
Overview 1 RT 1: 1-6307 bp Neighborhood of RT #1 [1, 6327] RVT-GII GIIM Hydantoinase_B HyuA Feature: gene Location: 1-282 bp Feature: gene Location: 463-972 bp Feature: gene Location: 947-2155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 39-1 754 bp Feature: domain Description: GIIM Note: maturase Location: 1808-2036 bp Feature: domain Description: GIIM Note: maturase Location: 1 808-2036 bp Feature: gene Location: 2456-4201 bp Feature: domain Description: Hydantoinase_B Location: 2471-4055 bp Feature: domain Description: Hydantoinase_B Location: 2471 -4055 bp Feature: gene Location: 4237-6327 bp Feature: domain Description: HyuA Location: 4252-6307 bp Feature: domain Description: HyuA Location: 4252-6307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Hydantoinase_B (pfam02538), HyuA (COG0145)

Seq: FPBC01000008.1 (264932 bp)
Overview 1 RT 1: 148947-154769 bp Neighborhood of RT #1 [148947, 154774] DUF2188 RVT_N RVT-GII GIIM HNH groEL groES Feature: gene Location: 148947-149171 bp Feature: gene Location: 149625-149849 bp Feature: domain Description: DUF2188 Location: 149643-149820 bp Feature: domain Description: DUF2 188 Location: 149643-14982 0 bp Feature: gene Location: 149965-151626 bp Feature: domain Description: RVT_N Location: 150019-150253 bp Feature: domain Description: RVT_N Location: 150019-1502 53 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150307-150952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150307-150952 bp Feature: domain Description: GIIM Note: maturase Location: 151003-151237 bp Feature: domain Description: GIIM Note: maturase Location: 151003-1512 37 bp Feature: domain Description: HNH Note: nucleases Location: 151477-151615 bp Feature: domain Description: HNH Note: nucleases Location: 151477-151615 bp Feature: gene Location: 152640-154286 bp Feature: domain Description: groEL Location: 152646-154266 bp Feature: domain Description: groEL Location: 152 646-1542 66 bp Feature: gene Location: 154334-154774 bp Feature: domain Description: groES Location: 154484-154769 bp Feature: domain Description: groES Location: 154484-154769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), groEL (PRK12852), groES (PRK14533)

Seq: FPBC01000016.1 (111510 bp)
Overview 1 RT 1: 21340-29330 bp Neighborhood of RT #1 [21340, 29338] InsE SLATT_5 RVT-UG17 AAA_23 SbcC ABC_ATPase MoxR Feature: gene Location: 21340-21648 bp Feature: domain Description: InsE Location: 21343-21628 bp Feature: domain Description: InsE Location: 213 43 -21628 bp Feature: gene Location: 21895-22461 bp Feature: domain Description: SLATT_5 Location: 21904-22432 bp Feature: domain Description: SLATT_5 Location: 21904-2243 2 bp Feature: gene Location: 22374-23822 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22686-23289 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22686-23 289 bp Feature: gene Location: 24003-27992 bp Feature: domain Description: AAA_23 Location: 24390-24750 bp Feature: domain Description: AAA_23 Location: 243 90-24750 bp Feature: domain Description: SbcC Location: 25293-25809 bp Feature: domain Description: SbcC Location: 25293 -25809 bp Feature: domain Description: ABC_ATPase Location: 26490-26646 bp Feature: domain Description: ABC_ATPase Location: 26490-26646 bp Feature: gene Location: 28241-29338 bp Feature: domain Description: MoxR Location: 28385-29330 bp Feature: domain Description: MoxR Location: 283 85-293 3 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), SLATT_5 (pfam18160), RVT-UG17, AAA_23 (pfam13476), SbcC (COG0419), ABC_ATPase (pfam09818), MoxR (COG0714)