myRT

myRT report for GCA_900116725.1_IMG-taxon_2619619030_annotated_assembly

Download annotations/find similar RTs

Seq: FPBS01000039.1 (18313 bp)
Overview 1 RT 1: 1480-5766 bp Neighborhood of RT #1 [1480, 5882] HTH_MARR RVT-GII GIIM PRiA4_ORF3 HemN Feature: gene Location: 1480-1917 bp Feature: gene Location: 1717-2151 bp Feature: domain Description: HTH_MARR Location: 1831-2137 bp Feature: domain Description: HTH_MARR Location: 1 831 -21 37 bp Feature: gene Location: 2236-3471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2437-3094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2437-3094 bp Feature: domain Description: GIIM Note: maturase Location: 3172-3403 bp Feature: domain Description: GIIM Note: maturase Location: 31 72-3403 bp Feature: gene Location: 4078-4236 bp Feature: domain Description: PRiA4_ORF3 Location: 4096-4186 bp Feature: domain Description: PRiA4_ORF3 Location: 4096-41 86 bp Feature: gene Location: 4482-5882 bp Feature: domain Description: HemN Location: 4599-5766 bp Feature: domain Description: HemN Location: 4599-5766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MARR (smart00347), RVT-GII, GIIM (pfam08388), PRiA4_ORF3 (pfam07929), HemN (COG0635)

Seq: FPBS01000013.1 (83257 bp)
Overview 1 RT 1: 50622-56115 bp Neighborhood of RT #1 [50622, 56115] HTH_CadR-PbrR-like AcrB RVT-G2L4 Feature: gene Location: 50622-50777 bp Feature: domain Description: HTH_CadR-PbrR-like Location: 50628-50730 bp Feature: domain Description: HTH_CadR-PbrR-like Location: 5062 8-50730 bp Feature: gene Location: 50848-53874 bp Feature: domain Description: AcrB Location: 50953-53782 bp Feature: domain Description: AcrB Location: 50953-53782 bp Feature: gene Location: 53892-54452 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 53898-54297 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 53898-542 97 bp Feature: gene Location: 54935-55084 bp Feature: gene Location: 55930-56115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_CadR-PbrR-like (cd04785), AcrB (COG0841), RVT-G2L4